Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq211 172 9e-38 >seq211 Length=310440 Score = 172 bits (190), Expect = 9e-38 Identities = 451/677 (67%), Gaps = 12/677 (2%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGCCGGT 203901 || || |||||||| |||| | | |||| ||||| | | ||| ||||||||||| || Sbjct 28595 TCAACAGTGAACTGGATGGGCTGGGCAGCAG-CCTGCGTGCGCAGGTAGTACATGCCCGT 28653 Query 203902 CTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTC 203961 ||| || ||| || ||| ||| | ||||||| | | |||| || | | || || Sbjct 28654 CTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATGGTCGGCTC 28713 Query 203962 GGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCA 204020 |||||| ||||| || ||||| |||||||| ||| || || || || ||||||| Sbjct 28714 ACGCATGTGGATGTTGAGCGACTGCGACTGGTCGAT-AAACGCACCACGGTCGGCGGCCA 28772 Query 204021 TATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTT 204080 | | | ||| || ||||| ||||||||||| |||||| ||| | |||| | Sbjct 28773 TCTGCACAATTGTGCGTTGCGAGATCTCCCACACAGTCTTGTACAGAGCCTTGGTCTCAG 28832 Query 204081 GAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 || | | | | || || |||||| ||| ||||| || | | || || | Sbjct 28833 CGGGGATGT-TAGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATG 28891 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | ||| ||||| ||||| || ||| ||| | ||| ||||| | || ||| Sbjct 28892 TTGTCCGACCACAGGCCCATGTCGACCAGGTCCTTGAGCAGCCACGGGTTCACGACCTGG 28951 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || |||| |||||| | || | | | |||| ||| | || ||||| |||| Sbjct 28952 AACTCGCCGGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCACTCG 29011 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 |||||||| | |||||| | ||| ||||||||||||||||||| ||||| |||| Sbjct 29012 TTGTTGCCCAGAATCTGCGAGGTCGACGCCGTGGGCATGGGAGCCATCAGCAGACTGTTG 29071 Query 204320 CGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGT 204379 || | ||||| | | || | || | || | | |||||| | || || Sbjct 29072 CGGATACCGTGCTCCTTGATCTTGAGACGGAGGGCGTCCCAGTCCCAGAGACCAGACGGC 29131 Query 204380 TTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTC 204439 || || |||||||||||||||| | |||||| || || |||||||||| ||||| | Sbjct 29132 TTGACATCCCACATGTCGAACTGCAGGATGCCCTGCGACACGGGGCTGCCCTCGTACGAC 29191 Query 204440 GGATAAGGCTGATCCTC---TTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTAC 204496 | || | || |||| || ||||| | |||| || | || |||| | ||| Sbjct 29192 GAGTA--GGTG-CCCTCAATCTCGGCCAGGTCCGACGACGCAGTCAGGGCGGCGTGGTAG 29248 Query 204497 ATGGTCTCAAAGATCTG 204513 |||||||| |||||||| Sbjct 29249 ATGGTCTCGAAGATCTG 29265 Score = 132 bits (146), Expect = 8e-26 Identities = 533/823 (65%), Gaps = 16/823 (2%) Strand=Plus/Plus Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982 |||| | || |||||| ||||||||| ||| ||||||||||| |||||| || | Sbjct 29594 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTG 29653 Query 204983 CCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTT 205041 ||| |||| |||| | ||| || ||| | ||||| | | |||| || ||| Sbjct 29654 CCGGTCTCGGTCTGGGCCTCG-AGGATGGCGTACCACAGCTTCTGGGCCTTAACGGTCTT 29712 Query 205042 CACGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACAC 205101 | | || | |||||| ||| |||||| ||| | || || |||||| Sbjct 29713 GATGCCGCGGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCA 29772 Query 205102 GTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTT-TC- 205159 ||| ||| || || || | || || ||||| || | |||| || |||| || Sbjct 29773 GTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGCGTCCACTCGCCAT--TCTTCTCG 29830 Query 205160 ACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATT 205219 || | || ||| |||||||| ||||||||| | |||||||| ||||| | | Sbjct 29831 ACACGCTTCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGATCGCGGGCGCGGACC 29890 Query 205220 CCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGG 205278 | || | || ||||||| || || || || || | | ||||||||||||||| Sbjct 29891 TCCTCCTTGCCGTGGTTCTTGCGCAGATCGAGG-AACTCGAAGACGTCGGCGTGCCACGG 29949 Query 205279 CTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGT 205338 ||| | | | | || || || | |||||| ||||||||||| || ||||| Sbjct 29950 CTCGAGGTAGATACAGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCAACGTAGCGAGC 30009 Query 205339 CATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTT 205398 | ||||| || |||||||| || | | ||||||| || ||||| |||| | Sbjct 30010 AGTGTTATTGAACACACGCAGCATGGGGATGATGCCGTTGGACGTGCCGTTGGTGCCGGC 30069 Query 205399 GATGGCCGAGCCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACAC 205456 ||| |||||| || | | || |||| | | ||| || ||||| | | Sbjct 30070 AATGTACGAGCCCGTCGCACGGATGCGGTGGACGTTG--AGGCCGATACCGCCGGCCGTC 30127 Query 205457 TTGGCGATCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGC 205515 |||| |||| ||||||| ||||| || ||| ||||||||| | ||| |||||| Sbjct 30128 TTGGAGATCATGGCGCACGTCTTG-AGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTT 30186 Query 205516 CAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCG 205574 | |||| || || ||||||| | ||||| ||| | ||||| |||| ||| |||| Sbjct 30187 GA-TGTCGACGAGGAAGCACGAGGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAAAGCG 30245 Query 205575 TGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCT 205634 |||| ||||||| ||||| ||| | | || | |||||||||| | || | | Sbjct 30246 TGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAATGACACGTT 30305 Query 205635 CCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCA 205694 | | | ||| || || | |||| | ||||| | ||| || || | ||| | Sbjct 30306 CAATGTTATCGCCCCAGATGCCGACAGCGACACGCATGATCATGTGCTGGGGACGCTCGA 30365 Query 205695 TCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGT 205737 | | | ||| | |||||||||||||| | ||| ||||| Sbjct 30366 CGATCTTGCCGTCGAGCTTGAGCAGATAGGAACGCTCGAGGGT 30408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150906161920