Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq113 260 2e-64 seq79 132 6e-26 seq10 127 3e-24 >seq113 Length=386244 Score = 260 bits (288), Expect = 2e-64 Identities = 435/626 (69%), Gaps = 6/626 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || || |||| ||||| || |||||||| Sbjct 101127 TCGAAGTCCTCACCACCCAGGTGAGTGTCACCGGCAGTCGACTTGACCTCGAAGATACCC 101186 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | ||||||||| || |||||||||||||| || || || || ||| Sbjct 101187 TCCTCAATGGTGAGGAGCGAAACATCGAAAGTACCACCACCCAGATCGAAGATCAGGACG 101246 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 101247 TTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCGGTGGGCTCG 101306 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||| ||||| | || || || || || || || Sbjct 101307 TTGATGATACGGAGGACGTTGAGGCCGGCAATGAGACCGGCGTCCTTGGTAGCCTGGCGC 101366 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || || || |||| | || | ||| || Sbjct 101367 TGGGAGTCGTTGAAGTAGGCGGGGACAGTGACAACGGCGTTGTTAACGGTGCCACCCAGG 101426 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||| | |||||||| || |||||||| || | | Sbjct 101427 TAGGACTCGGCGGTCTCACGCATCTTGATGAGAACCATGGAGGAAATCTCCTCGGGGGTG 101486 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || | || || || || || || ||||| | ||| || ||| |||| | | Sbjct 101487 AACTGCTTGTTCTCGCCCTTGAACTCGACCTCAATGACGGGCTT-GCCG--GCACGGTCG 101543 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | ||||| | | | | ||||| ||| | ||||||| |||| | ||||| | Sbjct 101544 ACGACCTTGAAAGGGAAGTGCTTCATGTCGGCCTGGACCTCGGGGTCGGCGAACTTGCGG 101603 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 101604 CCGATCAGACGCTTGGCGTCGAAGACCGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTG 101663 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | ||||| || || ||| | || || || || Sbjct 101664 GCGGCATCACCAATCAGACGCTC---CGTGTCCGTGAAGGCCACGAAGGACGGCGTGGTG 101720 Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || ||||| || || || || Sbjct 101721 CGGTTACCCTGGTCATTGGCGATGAT 101746 >seq79 Length=414659 Score = 132 bits (146), Expect = 6e-26 Identities = 377/572 (66%), Gaps = 13/572 (2%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT--AGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| || || |||||||| || || | |||| || |||||||| | | | Sbjct 192543 CAGCTCCTCGAAGCGGGCACGGGTGATC--TGCAGCGAGAAGTCCTCGCCGTCGAACAGC 192600 Query 7301 GAATCAATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || || || || ||||| | || ||||| | || | || ||||| || ||||| | Sbjct 192601 GAGTCGATCTCGATGGTGGCCTGGGTGCCGCTG--GACAGGGTGCGCTTGGCACGCTCGC 192658 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | ||| || |||||||| | | | | | || ||||| || | Sbjct 192659 AAGCAGTGCGCAGACGGCGCAGGGCACGGGCATCGCTGCCGAGGTCCTTCTTGGTCTTGC 192718 Query 7419 GTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | | || || ||| | | ||||| | || | | ||||| || | ||||||| Sbjct 192719 GGGTGAAGTCCTTCTTACAGTGGTCGA-GCAGGTTGGTGTCGAAGTCCTGGCCACCCAGA 192777 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || || || || || ||||| |||| ||| || | ||||| | || ||| Sbjct 192778 TGGGTGTCACCGGCCGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTTCAGCAGCGAG 192837 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTG 7594 ||||| || || || || ||||| || | || || ||||| || | | | ||| Sbjct 192838 ACATCGAAAGTGCCGCCGCCCAGATCGTAGATCAGGACGTTGCGCTCCTTGGCCGACTTG 192897 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 | |||||||||| || || || || || || || || || || ||||| || | Sbjct 192898 CCCGAGCCGAGACCGTAGGCAATGGCAGCAGCGGTGGGCTCGTTGATGATACGCAGGACG 192957 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||||||| | ||| | | || || || |||| || || || ||||| |||||| Sbjct 192958 TTCAGGCCCGAAATGGCACCGGCGTCCTTGGTCGACTGGCGCTGGTTGTCGTTGAAGTAG 193017 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 ||||||||||| | ||| || | | ||| ||||| |||| | || || || || Sbjct 193018 GCCGGGACCGTGATGACGGCCTTCTCGACCTTCTTGCCGATCTTGACCTCGGCAATCTCC 193077 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 ||||| ||||| || ||||| | || ||||| Sbjct 193078 TTCATCTTGGTCAGGACCATGGCGGAGATCTC 193109 >seq10 Length=127602 Score = 127 bits (140), Expect = 3e-24 Identities = 241/354 (68%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || || ||||||| ||| Sbjct 66023 ATCGAAATCCTCACCACCGAGATGGGTGTCACCGGCGGTAGCCAGAACCTCAAAGACACC 66082 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||||| | || || ||||| || ||||||||||| || || | | | | Sbjct 66083 CTGGTCAATGGACAGCAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGACAATAAT 66142 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | ||| |||| ||| || || |||||||| || || || || || || || Sbjct 66143 CTGGCGCTCGCCGTCAAG---CTTGTCCAGGCCGTACGCAATGGCGGCGGCGGTGGGCTC 66199 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | |||||| || |||||||||||| || | | ||||| || || || || || Sbjct 66200 GTTGACAATACGGAGGACGTTCAGGCCAGCGATGATACCGGCATCCTTGGTGGCCTGGCG 66259 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || || Sbjct 66260 CTGGTTGTCGTTGAAGTAGGCAGGGACAGTAACGACGGCGTGGGTGACCTTCTTGCCAAG 66319 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || |||| || ||||| |||| || | ||| || || | ||| || Sbjct 66320 GTAGCCCTCAGCGACCTCCTTCATCTTGGCGAGGATCATGGAGGAGACCTCCTC 66373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129370282880