Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq211 217 2e-51 seq393 138 1e-27 >seq211 Length=310440 Score = 217 bits (240), Expect = 2e-51 Identities = 1075/1696 (63%), Gaps = 49/1696 (3%) Strand=Plus/Plus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| || ||| || || ||||| ||||| |||||||| |||||| || | ||| Sbjct 28625 GCCTGCGTGCGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGC 28684 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACTG 109517 || | || ||| | ||||| ||| | ||| | ||| | |||||| ||||| Sbjct 28685 ATGCTGGTGATCTTGCCCATGGTCGG-CTCACGCATGTGGATGTTGAGCGACTGCGACTG 28743 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCA 109577 ||||| || |||||| || || ||||| | | || ||| || ||||| Sbjct 28744 GTCGATAAACGCACCACGGTCGGCGGCCATCTGCACAATTGTGCGTTGCGAGATCTCCCA 28803 Query 109578 GACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCC 109637 ||||||||||||| | |||| | ||| |||| |||| |||||| || || || || Sbjct 28804 CACAGTCTTGTACAGAGCCTTGGTCTCAGCGGGGATGTTAGGGATGTTCTGGATCGAACC 28863 Query 109638 ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC 109697 || | | ||| | | |||||| | | |||||| || || | | || || Sbjct 28864 GCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTCGACCAGGTC 28923 Query 109698 GTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGAT 109757 | | || | ||| || || || || || || || || || ||||||| Sbjct 28924 CTTGAGCAGCCACGGGTTCACGACCTGGAACTCGCCGGCCAGCACACGGCGCTGGTAGAT 28983 Query 109758 GTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGT 109817 ||| | ||||||||| ||||| ||||| |||||||| || || || | || || || || Sbjct 28984 GTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTCGACGCCGT 29043 Query 109818 GGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCAT 109877 ||||||||||||||| || |||||||| |||| ||| | | ||| | | ||| | Sbjct 29044 GGGCATGGGAGCCATCAGCAGACTGTTGCGGATACCGTGCTCCTTGATCTTGAGACGGAG 29103 Query 109878 TGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAG 109937 |||||||| || | ||||| | || |||||||||| || || || Sbjct 29104 GGCGTCCCAGTCCCAGAGACCAGAC------GGCTTGACATCCCACATGTCGAACTGCAG 29157 Query 109938 TACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAA 109997 | |||| | | || |||| | | | ||| | ||||||| |||||||| Sbjct 29158 GATGCCCTGCGACACGGGGCTGCCCTCGTACGACGAGTAGGTGCCCTCAATCTCGGCCAG 29217 Query 109998 CTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAG 110057 || || || || || || || || || || ||||| || || || || |||| Sbjct 29218 GTCCGACGACGCAGTCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGC---TTGTTGAG 29274 Query 110058 ---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGCTAGAC 110113 ||| | ||| | |||||||| | | || || | || |||| || |||| Sbjct 29275 CTCGCGGGCCTCGGGCGACTCGAAGGGCATGCG-CAGAGCCAGGAAGGCATCAGCCAGAC 29333 Query 110114 CCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG-------CGTCGAGCAGTT 110166 |||| ||||||| |||||||||||| || |||||| | | ||| ||| Sbjct 29334 CCTGGACACCGACACCAATGGGGCGGTGGCGCATGTTGCTGTTCTTGGCCTCGGGCA--- 29390 Query 110167 TCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTG 110226 ||||||| |||||| ||||||| || || || || ||| || ||| Sbjct 29391 ----CGGGGTAGAAGTTGACATCGATGATGCGGTTCAGGTTGCGGACAACAACCTGGGTG 29446 Query 110227 ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT-GACATATTTGGGGAG 110285 | || || || || | | | || | | |||| || | |||| | || || Sbjct 29447 ACCTCGTGCAGCTTCTTGAAGTCATA-GACCTCGTTGGTGTAGTCGACAAACGACGGCAG 29505 Query 110286 AGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTC 110345 || | || || || ||||| || | ||| || | | | ||| || | ||| || Sbjct 29506 GGCCAGCGAAGCCAGGTTGCAGACGGCGACCTCATCAGGGGCCGAGTACTCGACAATCTC 29565 Query 110346 CGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCA 110405 ||| |||| |||||| || ||| |||| ||||||||| || ||| |||||| Sbjct 29566 CGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 29625 Query 110406 TGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTT 110465 ||||| || |||||| | ||| | || || || ||||| | || ||| ||||| | Sbjct 29626 GTGGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTA 29685 Query 110466 CCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 ||| | | || | ||| || || | | || | || |||| ||||||||| || Sbjct 29686 CCACAGCTTCTG-GGCCTTAACGGTCTTGATGCCGCGGCCCTCCTTCTCGTACTTTTCGT 29744 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 ||| |||| || || | ||||| |||| || || || || || || | Sbjct 29745 ACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACA 29804 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 ||| | ||| | ||| || ||| || | |||||||||||||||||||||||||| | Sbjct 29805 TGAGCGTCCACTCGCCATTCTTCTCGACACGCTTCATGAACAGGTCAGGAATCCACAGGG 29864 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 || ||| || || ||| || |||| || | || ||||| ||| || || | | Sbjct 29865 CCAGGAACAGATCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGAGGA 29924 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG-- 110762 | || | || || | |||||| || ||||| |||| | || || || | |||| Sbjct 29925 ACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATACAGAAGGCACC---AGGACGCT 29981 Query 110763 ----ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAA 110818 || |||||| ||| ||||| || ||| |||||| || | ||||| || || | Sbjct 29982 TGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTATTGAACACACGCAGCATGGGGATGA 30041 Query 110819 TTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGA 110878 | || | ||| || || || || ||| || | ||||| ||| ||||| Sbjct 30042 TGCCGTTGGACGTGCCGTTGGTGCCGGCAATGTACGAGCCCGTCGCACGGATGCGGTGGA 30101 Query 110879 TATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCA 110937 | | || ||||| || ||| ||| || || ||| ||| |||| || | Sbjct 30102 CGTTGAGGCCGATACCGCCGGCCGTCTTGGAGATCATGGCGCACGTCT-TGAGCGTGTCG 30160 Query 110938 TAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGA 110997 || || || ||||| || ||||| || | | || ||||| || |||| ||| | Sbjct 30161 TAGATGCCCTCAATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGAGGACAGCTGGGCC 30220 Query 110998 CGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACA 111055 | ||||| || || ||||| || || || | || || ||| ||| |||| ||||| Sbjct 30221 TGGGGCGTGCCGGCGTTGAAAAGCGTGGGCGAGGCGTGGGTGA--AGAACTTGTTGGACA 30278 Query 111056 TCTTGTTGTATGTGTC 111071 | | |||||| || || Sbjct 30279 TGTAGTTGTAGGTCTC 30294 >seq393 Length=187465 Score = 138 bits (152), Expect = 1e-27 Identities = 324/480 (68%), Gaps = 18/480 (4%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||||||||||||||| || || | || || | || ||||| ||| | ||| ||| | Sbjct 155426 ACGATCGAAACGACCAGGACGCATCAGCGCCTTGTCGAGAATGTCGGGTCTGTTGGTACC 155367 Query 11562 GGCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTG 11618 ||| | ||| || | || | |||| ||| ||| |||||||| || ||||||| ||| Sbjct 155366 GGCGAGGACGACGA--CCTG-CTCAGACGTGTTGAAGCCGTCCATCTCCGTGAGAATCTG 155310 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACC---ACCTGCCGA----ACGCT 11671 ||| | || ||| ||||| |||||| | || | | || ||||| |||| Sbjct 155309 GTTCAGGGTGGCTTCGCGCTCGTCGTTGCCGC-CAGAGCTGAACTTGCCGTCGCCACGCG 155251 Query 11672 TCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731 ||| | ||||| || || || || || || || ||||| | | || || Sbjct 155250 AGCGACCAATGGCGTCGATTTCGTCAATAAAGACAATGCACGGCGCGCTCTTGCGAGCAG 155191 Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791 | || || || || ||||| ||| |||||||| || |||||||| ||||| | | Sbjct 155190 TCGCAAATAGATCGCGCACACGTGACGCACCAACACCGACAAACATCTCTACGAACTCGG 155131 Query 11792 --CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | || || ||||||| |||||| || ||||| |||||| | || || || || Sbjct 155130 AACCGCTGA-CACTGAA-GAAGGGCACGCCCGACTCGCCAGCGGTCGCCTTGGCCAGCAG 155073 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT 11909 || ||||| ||||| || | ||| | || | ||| || ||||||||||||||||| Sbjct 155072 TGTTTTACCGGTACCGGGAGGACCCGACAGGATGGCACCGCGGGGGATCTTGGCACCCAG 155013 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | | ||||||| |||| |||||||||| |||| |||| || || ||||||| Sbjct 155012 GCGCTCGAAGCGCTCGGGCTGCTTGAGGAAGCTGACAAACTCCATAATCTCGACCTTGGC 154953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972819529600