Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq211 214 2e-50 seq16 93.3 5e-14 >seq211 Length=310440 Score = 214 bits (236), Expect = 2e-50 Identities = 1056/1659 (64%), Gaps = 63/1659 (4%) Strand=Plus/Plus Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810 ||| |||||||| || ||| ||| |||| | ||| | ||||| | | ||| || || Sbjct 28795 GATCTCCCACACAGTCTTGTACAGAGCCTTGGTCTCAGCGGGGATGTTAGGGATGTTCTG 28854 Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870 || ||||| ||| | | ||| | | |||||| | | ||||| || || || | Sbjct 28855 GATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTC 28914 Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930 || || |||| || | ||| || | | ||||| || || || | | Sbjct 28915 GACCAGGTCCTTGAGCAGCCACGGGTTCACGACCTGGAACTCGCCGGCCAGCACACGGCG 28974 Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 105990 | | |||||||| | ||||||||| || ||||| || || || |||| || || | ||| Sbjct 28975 CTGGTAGATGTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGT 29034 Query 105991 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCG 106050 || || || ||||| || ||||||| |||||||| || | ||| | |||||||| Sbjct 29035 CGACGCCGTGGGCATGGGAGCCATCAGCAGACTGTTGCGGATACCGTGCTCCTTGAT--- 29091 Query 106051 TTCCTTGAGAA------CATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATA 106102 ||||||| | |||||||| || || | || || || | ||||||| Sbjct 29092 ---CTTGAGACGGAGGGCGTCCCAGTCCCAGA-GACCAGACGGCTTGACAT-CCCACATG 29146 Query 106103 TCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG 106162 || || || || | || || ||| ||| ||||| | | | |||| || | Sbjct 29147 TCGAACTGCAGGATGCCCTGCGACACGGGGCTGCCCTCGTACGACGAGTAGGTGCCCTCA 29206 Query 106163 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 106222 || |||| || | ||| ||||| ||||| || ||||| || ||||| | Sbjct 29207 ATCTCGGCCAGGTCCGACGACGCAGTCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGC 29266 Query 106223 GCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATA 106277 || | ||| ||| || || || || |||| || | || || Sbjct 29267 TTGTTGAGCTCGCGGGCCTCGGGCGACTCGAAGGGCATGCGCAGAGCCAGGAAGG----- 29321 Query 106278 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 106337 |||| || ||||| || ||||| | |||||| || | ||| ||||| || | ||| | Sbjct 29322 CATCAGCCAGACCCTGGACACCGACACCAATGGGGCGGTGGCGCATGTT-GCTGTTCTTG 29380 Query 106338 CAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAA 106394 | ||| ||||| || || || || |||| ||||| || || | ||||| Sbjct 29381 --GCCTCGGGCACGGGGTAGAAGTTGACATCGATGATGCGGTTCAGGTTGCGGACAACAA 29438 Query 106395 TCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT-GACATAC 106453 || |||| || || || || | | ||| | | | || | | | |||| || Sbjct 29439 CCTGGGTGACCTCGTGCAGCTTCTTGAAGTCATA-GACCTCGTTGGTGTAGTCGACAAAC 29497 Query 106454 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 106513 || ||||| | || |||| ||||| || || |||||| | | |||||| Sbjct 29498 GACGGCAGGGCCAGCGAAGCCAGGTTGCAGACGGCGACCTCATCAGGGGCCGAGTACTCG 29557 Query 106514 AAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTT 106573 | ||| || || |||| |||||| || || || |||| ||||| ||||| ||||| Sbjct 29558 ACAATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTG 29617 Query 106574 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGA 106633 |||||| |||||||| |||||| |||| | || ||||| ||||| | || ||| Sbjct 29618 CGGTTGCAGTGGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGG 29677 Query 106634 ATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG--GCC-CGTCCCTCCGCCTC 106689 || || | ||||| | || | | || || || ||| ||| || |||||| ||| Sbjct 29678 ATGGCGTACCACAGCTTCTGGGCCTT----AACGGTCTTGATGCCGCGGCCCTCCTTCTC 29733 Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 ||||||| ||| || || || ||||| ||||| ||| | || || || || Sbjct 29734 GTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTC 29793 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 || || || | || | ||| | ||| || ||| || ||||||||||| ||||| || Sbjct 29794 GTTAGGGCACATGAGCGTCCACTCGCCATTCTTCTCGACACGCTTCATGAACAGGTCAGG 29853 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 ||||||||||| || ||||| | || |||| || | || ||||| || Sbjct 29854 AATCCACAGGGCCAGGAACAGATCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCG 29913 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 | || |||||||| | || || |||||||| ||||| || |||| || | || Sbjct 29914 CAGATCGAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATACAGAAGGCACC 29973 Query 106930 CTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 ||||| ||| | || | || ||||| || ||| || || || || || Sbjct 29974 ---AGGACGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTATTGAACACACGCAG 30030 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCT 107041 ||| || || || || | || || || || || || |||||| | || Sbjct 30031 CATGGGGATGATGCCGTTGGACGTGCCGTTGGTGCCGGCAATGTACGAG--CCCGTCGCA 30088 Query 107042 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101 | | |||| || | || ||||| || ||| ||| ||||| || ||| | Sbjct 30089 CGGATGCGGTGGACGTTGAGGCCGATACCGCCGGCCGTCTTGGAGATCATGGCGCACGTC 30148 Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161 | || || | ||||| || | || ||| |||||| || ||| |||||||| | Sbjct 30149 TTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGAG 30208 Query 107162 GACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 107220 |||| ||| || || || || || || ||||| || || || | ||||| |||| | Sbjct 30209 GACAGCTG-GGCCTGGGGCGTGCCGGCGTTGAAAAGCGTGGGCGAGGCGTGGGTGAAGA- 30266 Query 107221 ACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGC 107279 || | | |||||| | || ||| ||||| | |||| ||||||| || || ||||| Sbjct 30267 ACTTGTTGGACATGTAGTTGTAGGTCTCAATGACACGTTCAATGTTATCGCCCCAGATGC 30326 Query 107280 CGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTT 107339 ||| || |||||||| | ||||| ||||| || | || |||| |||||| || Sbjct 30327 CGACAGCGACACGCATGATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGC--TT 30384 Query 107340 GA--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 || |||||| ||| ||||| |||| ||||||||| Sbjct 30385 GAGCAGATAGGAACGCTCGAGGGTCTTGAAACCAAAGTA 30423 >seq16 Length=123879 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| || ||||| || || || || || || || |||||| ||||| Sbjct 4157 GGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCC 4098 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| ||||| |||||||| | ||| | || | | |||| | || ||||||||||| Sbjct 4097 GGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGAGGAGAAGGCGCCCGAGAAGAAGAT 4038 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 |||||| || || || |||| || |||| ||| |||| Sbjct 4037 ACCCTCGACGGCAGCGAAAGCAACGAGACGCTGGGCAAAGG 3997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977614103680