Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq23 138 9e-28 >seq23 Length=113490 Score = 138 bits (152), Expect = 9e-28 Identities = 192/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 ||||| ||||| ||| ||| |||||| || |||| ||||||| || || ||| Sbjct 14127 AGCTGGTCCACGCCCTGGCCCTCGTAGTCGGCGTGTGGGTCCTTGTACTCGGCACCAAAA 14068 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 || | ||||||||| ||||| || || || ||||| || ||||| | || ||||||| Sbjct 14067 TGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGGTCAGTGAAGCCC 14008 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30294 ||| || | ||| | | || |||||| ||||||||||||| || ||||| |||| | Sbjct 14007 ATCTGATCGAGGAAGGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTTTTCGGCG 13948 Query 30295 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30354 ||| | ||| | || || | || ||||||||| ||||| || | |||||| | Sbjct 13947 AGCGTGGTCGAGGTGGTCTCGCCGCGGATGAACCACAGGAGCTCTTCGATGACGGCGCGC 13888 Query 30355 CAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 |||||||| |||||| || || || || Sbjct 13887 GTAAAGACCCGCTTGGTTGTCAGCAGAGG 13859 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 29750 TGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 29809 |||| ||| | || || || || | | ||| | | ||| ||||| |||| ||| | | Sbjct 14564 TGTTGATCTTGAGCGTTGGGAACGCCCGGGGAACACGCTCCAGCTGTGTCTCCAGAGCGT 14505 Query 29810 CCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTA 29869 | |||||||| ||||||||| ||||| |||| | ||| || || || | | Sbjct 14504 CGACGTGATCGGCGTAGACGTGCGCGTCGCCCATGACATGGGTCAAGGAGCCGGGGACGA 14445 Query 29870 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 29929 | | ||| | |||| ||||| || || |||| ||| || ||||| ||||| | Sbjct 14444 GGTTGCAGACACGGGCCAGCATGTGTGTCAGCAGAGCGTACGAAGCAATGTTGAAGGGCA 14385 Query 29930 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 | ||||| |||||||| | |||| |||||||||||| || Sbjct 14384 CGCCGAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 14345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615448628336