Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq245 91.5 2e-13 >seq245 Length=299586 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 197032 TCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGATTGTAA 197091 |||||||||||||| ||||| || || | | |||||| | | ||||| || ||||| Sbjct 161291 TCGCTAAAGCCCGTGCCGATGTTGCACACCGTCTCGTACGTGTCGTTGTTGGCATTGTGG 161350 Query 197092 CAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCG 197151 || || || | ||| |||||||| ||| | ||| ||| |||| | || | || Sbjct 161351 CACGCCAGCAGGAACGCGCCGTACACCGACGTGCGCTTGCCCTTGCCGTAGTAGGCGCCC 161410 Query 197152 ATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGC 197211 | || ||||| ||||| | ||||| || || || ||| || ||||| | |||||| Sbjct 161411 AGCACGACCAGGTCCAGCGAGTCGCCGACGCCCGACAGGTAGTCCTTCTTGATCTTGAGC 161470 Query 197212 CAGCTTCTAGATCTCTTGGCAATCTCGTA---GGTTGCGTTTACGTCCAGGGTCTTGATC 197268 ||| | | || | |||| |||||| | | | | ||||||| |||||| | Sbjct 161471 CAGTTGCGCGACCGCTTGCTCGGCTCGTATCCGCTCTCTGTGCCGTCCAGCATCTTGACC 161530 Query 197269 ATCAATCCCTCGCA 197282 |||| |||||||| Sbjct 161531 ATCAGGCCCTCGCA 161544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676725945660160