Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq211 203 4e-47 seq16 93.3 5e-14 seq393 82.4 9e-11 >seq211 Length=310440 Score = 203 bits (224), Expect = 4e-47 Identities = 1051/1656 (63%), Gaps = 57/1656 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAACGGCTCGATGGCATCCTCA 75203 ||||||||| |||| ||||| ||| |||||| |||| |||||| |||| || Sbjct 30423 TACTTTGGTTTCAAGACCCTCGAGCGTTCCTATCTGCTCAA--GCTCGACGGCAAGATCG 30366 Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263 | || || ||| ||||| ||||||| ||||| |||||||| || || |||||| Sbjct 30365 TCGAGCGTCCCCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGCGATAACATTG 30306 Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCA 75322 | |||| | ||||| ||| || | |||||| | | || | |||| ||||| | || Sbjct 30305 AACGTGTCATTGAGACCTACAACTACATGTCCAACAAGT-TCTTCACCCACGCCTCGCCC 30247 Query 75323 ACCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381 || || ||||| || || || || || || ||| ||||| |||||||| ||| || Sbjct 30246 ACGCTTTTCAACGCCGGCACGCCCCAGGCC-CAGCTGTCCTCGTGCTTCCTCGTCGACAT 30188 Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441 |||||| ||| || | || ||||| | || || | | ||| || ||||| || Sbjct 30187 CAAGGACGACAGCATTGAGGGCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAA 30128 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TT 75499 | ||| || ||||| || | || |||| | | || | |||||| || Sbjct 30127 GACGGCCGGCGGTATCGGCCTCAACGTCCACCGCATCCGTGCGACGGG--CTCGTACATT 30070 Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559 || || || || || | || || || || ||||| || || || || ||| Sbjct 30069 GCCGGCACCAACGGCACGTCCAACGGCATCATCCCCATGCTGCGTGTGTTCAATAACACT 30010 Query 75560 GCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTG 75613 || ||||| || | || | || ||||| || || || ||||| | Sbjct 30009 GCTCGCTACGTTGACCAGGGTGGCAACAAGCGTCCT---GGTGCCTTCTGTATCTACCTC 29953 Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAA 75673 || || ||||| ||||| || | |||||||| || | || ||||| || | || Sbjct 29952 GAGCCGTGGCACGCCGACGTCTTCGAGTTCCTCGATCTGCGCAAGAACCACGGCAAGGAG 29893 Query 75674 GAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733 |||| || | ||||| || ||||||||||||| ||||| ||||||||||| Sbjct 29892 GAGGTCCGCGCCCGCGATCTGTTCCTGGCCCTGTGGATTCCTGACCTGTTCATGAAGCGT 29833 Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793 || ||| || ||| | ||| | || | || || || || || || || | ||| Sbjct 29832 GTCGAGAAGAATGGCGAGTGGACGCTCATGTGCCCTAACGAGTGCCCTGGCCTGGCTGAC 29773 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 ||||| ||||| || || || ||| |||||| || ||||||| | | || Sbjct 29772 TGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCCGCGGCATC 29713 Query 75854 GCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912 ||| || || | | || | | ||| | || || ||| | | ||||| ||||| || Sbjct 29712 AAGACCGT-TAAGGCCCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGG 29654 Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972 | || | ||||| |||||||| || ||| ||||| ||||| ||||| |||| Sbjct 29653 CAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGG 29594 Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032 || ||| ||||| || || |||||||| ||| | |||||| | | |||||| Sbjct 29593 CACCATCCGCAGCTCCAACCTGTGCACGGAGATTGTCGAGTACTCGGCCCCTGATGAGGT 29534 Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC-AATGAAGAGACTCGCA 76091 || || ||||| |||| || | ||||| || || |||| | | | || | Sbjct 29533 CGCCGTCTGCAACCTGGCTTCGCTGGCCCTGCCGTCGTTTGTCGACTACACCAACGAGGT 29474 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | | ||| | | || || || || |||| || ||||| | || || ||||| Sbjct 29473 C-TATGACTTCAAGAAGCTGCACGAGGTCACCCAGGTTGTTGTCCGCAACCTGAACCGCA 29415 Query 76152 TCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACA 76208 |||| || || || || ||||| ||| | | ||| | || ||||| ||| Sbjct 29414 TCATCGATGTCAACTTCTACCCCGTGCCCGAGGC--CAAGAACAGC-AACATGCGCCACC 29358 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA- 76267 | || |||||| | ||||| || ||||| || |||| || || | || |||| Sbjct 29357 GCCCCATTGGTGTCGGTGTCCAGGGTCTGGCTGATG-----CCTTCCTGGCTCTGCGCAT 29303 Query 76268 ----TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 || || || || ||| ||| | || | ||||| || ||||| || || Sbjct 29302 GCCCTTCGAGTCGCCCGAGGCCCGCGAGCTCAACAAGCAGATCTTCGAGACCATCTACCA 29243 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 ||| ||||| ||| | || |||| || | || |||| | | | || Sbjct 29242 CGCCGCCCTGACTGCGTCGTCGGACCTGGCCGAGATTGAGGGCACCTACTCGTCGTACGA 29183 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC--AAG 76441 ||| |||| ||| || || | || ||||| || ||||||| | || || || | Sbjct 29182 GGGCAGCCCCGTGTCGCAGGGCATCCTGCAGTTCGACATGTGGG-ATGTCAAGCCGTCTG 29124 Query 76442 CTCAACTACGACTGGGATG------TTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGT 76495 || || |||||||| | ||||||| ||||||||| | ||| | || Sbjct 29123 GTC-TCTGGGACTGGGACGCCCTCCGTCTCAAG------ATCAAGGAGCACGGTATCCGC 29071 Query 76496 AACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 76555 |||||||| ||||||| || ||||| || || || ||| | || || |||| || || Sbjct 29070 AACAGTCTGCTGATGGCTCCCATGCCCACGGCGTCGACCTCGCAGATTCTGGGCAACAAC 29011 Query 76556 GAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTT 76615 || ||||| || || ||||| | |||||||||| | | | || || || ||||| Sbjct 29010 GAGTGCTTCGAGCCCTACACGTCCAACATCTACCAGCGCCGTGTGCTGGCCGGCGAGTTC 28951 Query 76616 GTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGAT 76675 | || ||| | || |||| ||||| | || || || ||||| | | Sbjct 28950 CAGGTCGTGAACCCGTGGCTGCTCAAGGACCTGGTCGACATGGGCCTGTGGTCGGACAAC 28891 Query 76676 ATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGAT 76735 |||||| | | ||| | | ||| ||||| || || || ||| | | ||||| | | Sbjct 28890 ATGAAGAACCGCATCATTGCCGAGGGCGGTTCGATCCAGAACATCCCTAACATCCCCGCT 28831 Query 76736 GATATCAAGAATCTCTACCGCACAGTGTGGGAAATC 76771 || | |||| ||| ||| || |||||||| ||| Sbjct 28830 GAGACCAAGGCTCTGTACAAGACTGTGTGGGAGATC 28795 >seq16 Length=123879 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||| |||| || |||| || || || ||||||||||||||||| || | | Sbjct 3997 CCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGCGCCT 4056 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 ||| | | || | ||| | |||||||| ||||| ||||| ||||| |||||| || | Sbjct 4057 TCTCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGCCTGACCTTCTCCAACG 4116 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 | || || || || || ||||| || ||| || |||||| Sbjct 4117 AGCTCATCTCGCGTGACGAGGGCCTGCACACCGACTTTGCC 4157 >seq393 Length=187465 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||||||||||||||| || ||| | || ||||| || ||||| || || || || Sbjct 155016 GGTGCCAAGATCCCCCGCGGTGCCATCCTGTCGGGTCCTCCCGGTACCGGTAAAACACTG 155075 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAA 175393 || ||| || | ||| || || || || || ||| || |||| || || | | Sbjct 155076 CTGGCCAAGGCGACCGCTGGCGAGTCGGGCGTGCCCTTCTTC-AGTG-TCAGCGGTTCCG 155133 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | || || ||||||||||| ||||| ||||| | | || |||||||| |||| | | Sbjct 155134 AGTTCGTAGAGATGTTTGTCGGTGTTGGTGCGTCACGTGTGCGCGATCTATTTGCGACTG 155193 Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | ||| | | || || |||||||| ||||| || || || || Sbjct 155194 CTCGCAAGAGCGCGCCGTGCATTGTCTTTATTGACGAAATCGACGC 155239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566378524160