Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq113 282 6e-71 seq10 114 2e-20 seq79 105 9e-18 >seq113 Length=386244 Score = 282 bits (312), Expect = 6e-71 Identities = 438/625 (70%), Gaps = 3/625 (0%) Strand=Plus/Minus Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||| ||| | |||||||| || ||||| || || || || | ||| ||||| || || | Sbjct 101748 AGATCATCGCCAATGACCAGGGTAACCGCACCACGCCGTCCTTCGTGGCCTTCACGGACA 101689 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 || ||||| |||| |||||||| || || ||| || |||||||| || || | Sbjct 101688 CGGAGCGTCTGATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACGG 101629 Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542 |||| ||||| |||||||| || || |||||||| | || | ||||| | ||| | Sbjct 101628 TCTTCGACGCCAAGCGTCTGATCGGCCGCAAGTTCGCCGACCCCGAGGTCCAGGCCGACA 101569 Query 195543 TAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTG 195602 | ||| ||| ||| | || || | ||| | | ||||| | ||| | || | Sbjct 101568 TGAAGCACTTCCCTTTCAAGGTCGTCGACCGTG---CCGGCAAGCCCGTCATTGAGGTCG 101512 Query 195603 AATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 | || | || ||||| || || || | ||||| || ||||| || ||||| | || | Sbjct 101511 AGTTCAAGGGCGAGAACAAGCAGTTCACCCCCGAGGAGATTTCCTCCATGGTTCTCATCA 101452 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| ||||| || || || | | ||||| || || || | || ||||| |||| Sbjct 101451 AGATGCGTGAGACCGCCGAGTCCTACCTGGGTGGCACCGTTAACAACGCCGTTGTCACTG 101392 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || || ||||| || |||||||| | | ||||| | Sbjct 101391 TCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAGGACGCCGGTCTCATTGCCG 101332 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| || | || ||||| || || || || ||||| ||||| || ||||| | Sbjct 101331 GCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGTCTTG 101272 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||||| || | || || || ||||||| ||||| ||||||||||| || | Sbjct 101271 ACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGATCTGGGTGGTGGTACTTTCG 101212 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 |||| || || |||| ||||| | ||||| ||||| || ||| | ||||| ||||| | Sbjct 101211 ATGTTTCGCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCAAGTCGACTGCCGGTGACA 101152 Query 195963 CTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || |||||||| || ||||| Sbjct 101151 CTCACCTGGGTGGTGAGGACTTCGA 101127 Score = 224 bits (248), Expect = 1e-53 Identities = 546/825 (66%), Gaps = 13/825 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || || || | ||||| || || |||||||| || || || || ||| | || Sbjct 100450 GCCCTGCGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTTTCGTCTTCCGCC 100391 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | ||||| || ||| |||| || || ||||||||||| || | || ||| Sbjct 100390 CAGACCTCCATCGAGATCGACTCGCTGTTCGAGGGCATTGACTTCTACACCTCGATCACC 100331 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| || || || ||| | | || |||| | || | || ||||| Sbjct 100330 CGTGCCCGCTTCGAGGAGCTTTGCCAGGACCTGTTCCGCTCCACCCTGCAGCCCGTTGAC 100271 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || ||||| ||||| || ||||| |||| | || || ||||| || || Sbjct 100270 CGTGTCCTGACGGACGCCAAGATCGACAAGTCCCAGGTCCACGAGATCGTCCTGGTCGGC 100211 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || ||||||||||| || || || | || | || |||||| || || Sbjct 100210 GGTTCCACCCGTATTCCCCGCATCCAGAAGCTCATTACCGACTACTTCAACGGCAAGGAG 100151 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| ||||| || ||||| || || || ||||| |||||||| Sbjct 100150 CCCAACAAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGCGCTGCCGTCCAGGCTGCC 100091 Query 196421 ATTCTCTCAGGTGTTGACAAT--AATAACGTCCA------AGATCTTCTGCTACTTGATG 196472 |||||| | | ||||| | | ||||| ||||| ||||| || || | Sbjct 100090 ATTCTC---AGCGGTGACACTTCGTCCAAGTCCACCAACGAGATC--CTGCTGCTCGACG 100036 Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532 |||| || | || || ||| | || || || ||||| | ||||| || | ||| Sbjct 100035 TTGCCCCTCTGTCTCTCGGTATCGAGACCGCCGGTGGCATGATGACCAAGCTCATTCCCC 99976 Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAAC 196592 | ||||| || || || || |||||| | ||||| || || | || || || || | Sbjct 99975 GCAACACCACCATCCCCACCAAGAAGTCCGAGGTCTTCTCGACCTTCTCTGACAACCAGC 99916 Query 196593 CAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTAC 196652 | ||||| | || || || || || || || ||| || | ||||| ||| | || Sbjct 99915 CTGGTGTGCTGATCCAGGTCTACGAGGGTGAGCGCCAGCGCACCAAGGACAACAACCTGA 99856 Query 196653 TTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 | || | ||||| | || || || || | || ||| | |||||||| ||||| | | Sbjct 99855 TGGGCAAGTTCGAGCTCACCGGTATCCCCCCCGCTCCCCGCGGTGTTCCCCAGATCGAGG 99796 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 || |||||| | ||||| || || || | |||||| | |||| || |||| | | Sbjct 99795 TTACCTTCGACCTGGACGCCAACGGTATCATGAACGTCTCGGCTGTCGAGAAGGGCACCG 99736 Query 196773 GCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTG 196832 |||| || | |||| || || ||||| |||||||| || || || ||||| || || | Sbjct 99735 GCAAGTCCAACCAGATCGTCATCACCAACGACAAGGGCCGCCTGTCCAAGGACGACATCG 99676 Query 196833 AACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 | || ||| || || || || |||| || ||| || ||||||| Sbjct 99675 AGCGCATGCTTGCTGAGGCCGAGAAGTTCAAGGAGGAGGACGAGG 99631 >seq10 Length=127602 Score = 114 bits (126), Expect = 2e-20 Identities = 195/279 (70%), Gaps = 3/279 (1%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || ||||| ||||| ||||||| || || || ||||| || ||||| || Sbjct 66298 GCCGTCGTTACTGTCCCTGCCTACTTCAACGACAACCAGCGCCAGGCCACCAAGGATGCC 66239 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | || || || || ||| || | ||| |||| || || || || || || ||| Sbjct 66238 GGTATCATCGCTGGCCTGAACGTCCTCCGTATTGTCAACGAGCCCACCGCCGCCGCCATT 66179 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || || ||||||||| | | ||| | | || ||||| ||| ||||| ||| Sbjct 66178 GCGTACGGCCTGGACAAGCTTGACGGCGA-GCGCCAGAT-TATTG-TCTACGATCTTGGT 66122 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || |||||||| || || ||||| ||| | || || || |||| Sbjct 66121 GGTGGTACTTTCGATGTCTCCCTGCTGTCCATTGACCAGGGTGTCTTTGAGGTTCTGGCT 66062 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || ||||| || ||||| |||||||| ||||||||| Sbjct 66061 ACCGCCGGTGACACCCATCTCGGTGGTGAGGATTTCGAT 66023 >seq79 Length=414659 Score = 105 bits (116), Expect = 9e-18 Identities = 239/359 (67%), Gaps = 3/359 (1%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||| | || || || | ||||| ||| ||||||||||||| ||| || || Sbjct 193115 CCCCAGGAGATCTCCGCCATGGTCCTGACCAAGATGAAGGAGATTGCCGAGGTCAAGATC 193056 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || || | || | | || || | || || || || ||||||| || || || Sbjct 193055 GGCAAGAAGGTCGAGAAGGCCGTCATCACGGTCCCGGCCTACTTCAACGACAACCAGCGC 192996 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||| |||| |||||||| | ||| ||| |||| || ||| || | || ||||| || Sbjct 192995 CAGTCGACCAAGGACGCCGGTGCCATTTCGGGCCTGAACGTCCTGCGTATCATCAACGAG 192936 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAA---GGACGAAGATAAAAAT 195868 || || || ||||| ||||| || ||||| | | | ||| || | | || || Sbjct 192935 CCCACCGCTGCTGCCATTGCCTACGGTCTCGGCTCGGGCAAGTCGGCCAAGGAGCGCAAC 192876 Query 195869 GTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGT 195928 || |||||| ||||| || || || || || |||||||| || || || || | || Sbjct 192875 GTCCTGATCTACGATCTGGGCGGCGGCACTTTCGATGTCTCGCTGCTGAACATCCAGGGC 192816 Query 195929 GGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||| | ||| || ||||| || || ||||| || ||||| ||||| | || ||||| Sbjct 192815 GGTGTCTTCACCGTCAAGGCCACGGCCGGTGACACCCATCTGGGTGGCCAGGACTTCGA 192757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858847543040