Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq222 105 6e-18 >seq222 Length=662048 Score = 105 bits (116), Expect = 6e-18 Identities = 210/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || | | || | |||||||||| |||||| || || || | Sbjct 55799 GTCTCGGGGTTCTTGCACTTCTTGCAGAGCACAAACTTGGAGATGAAGCCGTCGAGGTAG 55858 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| ||| ||||||| ||||||| ||| | || || | ||| Sbjct 55859 TCCTGGAGCTTGGCGGCCTCGTGGGCACCGTTGATGATCCAGCGGTCATCGGGAGGATCA 55918 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || ||||| |||||| | || |||||||| | | || | | ||||| Sbjct 55919 ATGTTGGTCTGGGCGCCGAGCTCGAAGCCAAAGTACTTGATAAGATAGGCGCCAGGACGG 55978 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | ||| || || | | | || |||| || || |||||||| ||||||||||| Sbjct 55979 GCCAGCTGCTGAGCAACCTGGCTCAGGTTGGGGACAACGGTCTTGATACCGTTGCCCTTG 56038 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 || |||| ||||| ||||||| ||| |||||||||||||| |||| | || | Sbjct 56039 CCCTCGATCTTGGTCTGGATGCGCTCCATCTTGTAGCGGTAGAAGACGTCGGTGACGTCA 56098 Query 34621 CGGTTAACGTT 34631 ||| |||||| Sbjct 56099 CGGCGAACGTT 56109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839426388976