Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq211 480 8e-131 seq16 179 4e-40 seq67 132 5e-26 seq390 123 2e-23 seq86 118 1e-21 >seq211 Length=310440 Score = 480 bits (532), Expect = 8e-131 Identities = 1247/1872 (67%), Gaps = 63/1872 (3%) Strand=Plus/Plus Query 147938 GGCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTA 147997 |||||| | || |||||||| |||||||||||||||||||| |||| ||| || Sbjct 28618 GGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGT 28677 Query 147998 GTCGTGCA--CCGACGA-CATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGA 148054 | ||||| | | || | || | || ||||| | ||| | || | ||| Sbjct 28678 GAAGTGCATGCTGGTGATCTTGCCCATG---GTCGGCTCACGCATGTGGATGTTGAGCGA 28734 Query 148055 CTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTAT 148111 ||| |||||| || ||||| |||||||| |||||||| | |||| || || || Sbjct 28735 CTGCGACTGGTCGATAAACGCACCACGGTCGGCGGCCATCTGCACAATT-GT-GCGTTG- 28791 Query 148112 CTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCG 148171 | |||||||| | ||||||||||| |||| | | | |||| ||| |||| Sbjct 28792 CGAGATCTCCCACACAGTCTTGTACAGAGCCTTGGTCTCAGCGGGGATGTTAGGGATGTT 28851 Query 148172 CTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAG 148231 ||| | ||| |||| | |||| || | || ||| | ||||| | ||| | Sbjct 28852 CTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCAT 28911 Query 148232 CTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCG 148291 |||| |||||| | || ||| || | ||||| ||||| ||||||||||| ||||| || Sbjct 28912 GTCGACCAGGTCCTTGAGCAGCCACGGGTTCACGACCTGGAACTCGCCGGCCAGCACACG 28971 Query 148292 CCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 ||| | || | |||| ||| | || || || ||||||||||||||| |||||||| Sbjct 28972 GCGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGA 29031 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 ||||| |||||||||||| || | |||||| |||||| | |||| | | || || Sbjct 29032 GGTCGACGCCGTGGGCATGGGAGCCATCAGCAGACTGTTGCGGATACCGTGCTCCTTGAT 29091 Query 148412 TTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTA 148471 ||| | || || ||||||||||||| ||||| | || | |||||||||| | Sbjct 29092 CTTGAGACGGAGGGCGTCCCAGTCCCAGAGACCAGACGGCTTGACATCCCACATGTCGAA 29151 Query 148472 CTGCAGAATGCCGCGGCTA-GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCG 148530 |||||| ||||| | || | ||||||||||||||||||| ||| | || | | Sbjct 29152 CTGCAGGATGCC-CTGCGACACGGGGCTGCCCTCGTACGACGAGTAGGTGCCCTCAATCT 29210 Query 148531 CCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 | ||||| || | ||| || ||| ||| ||| || |||||| || ||| ||| Sbjct 29211 CGGCCAGGTCCGACGACGCAGTCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGT 29270 Query 148591 TGAGCAGCGCCGCCGACTCGC-TTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCA 148649 ||||| ||| | | | || ||| | ||||| ||||| || || || || || Sbjct 29271 TGAGC-TCGCGGGCCTCGGGCGACTCGAAGGGCATGCGCAGAGCCAGGAAGGCATCAGCC 29329 Query 148650 AGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG 148709 || ||||| || || || |||||||| ||||| ||||| | | | | |||| Sbjct 29330 AGACCCTGGACACCGACACCAATGGGGCGGTGGCGCATGTT---GCTGTTCTTGGCCTCG 29386 Query 148710 AGC---GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766 || || ||| |||| |||||||| || || ||||| || || |||| || Sbjct 29387 GGCACGGGGTAGAAGTTGACATCGATGATGCGGTTCAGGTTGCGGACAACAACCTGGGTG 29446 Query 148767 ATTCTGCGCAGC------AATTCA---AAATCGTACTTGTCATCTACGATGCATCGGTTC 148817 | | ||||| || ||| | |||| ||| || || | | ||| | Sbjct 29447 ACCTCGTGCAGCTTCTTGAAGTCATAGACCTCGTTGGTGTAGTCGAC-AAACGACGG--C 29503 Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 | ||| | || || || ||||| ||||| |||||| ||||| |||||| || ||| Sbjct 29504 AGGGCCAGCGAAGCCAGGTTGCAGACGGCGACCTCATCAGGGGCCGAGTACTCGACAATC 29563 Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937 || | |||||| ||| || ||| ||||| |||||| || |||||||||| |||| Sbjct 29564 TCCGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG 29623 Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---G 148994 || |||||||||||||||| | || ||| || || ||| | || | || | Sbjct 29624 CAGTGGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCG 29683 Query 148995 AACCGATGCAGGTCCTGCGC----GCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA 149050 ||| ||| | ||| || || |||| ||| ||| ||||||| |||||| Sbjct 29684 TACC---ACAGCTTCTGGGCCTTAACGGTCTTGATGC----CGCGGCCCTCCTTCTCGTA 29736 Query 149051 --TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 | ||| | ||| ||||||| | || |||||||| || | || || ||||||| | Sbjct 29737 CTTTTCGTACAGAGC--CTCGAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCG 29794 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | ||||||||||||| |||| |||| | | | || |||||||| ||||| || || Sbjct 29795 TTAGGGCACATGAGCGTCCACTCGCCATTCTTCTCGACACGCTTCATGAACAGGTCAGGA 29854 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | ||| || || | || ||||| || | || || ||| ||| |||| Sbjct 29855 ATCCACAGGGCCAGGAACAGATCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGC 29914 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 || | ||| | ||| | ||| |||||||||||||| | ||| | || || || Sbjct 29915 AGATCGAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATACAGAAGGCACCA 29974 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 ||| ||||| |||||||| |||| ||| | |||| || ||||| || | ||| Sbjct 29975 GGACGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTATTGAACACACGCAGCATG 30034 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCA 149403 || ||||| ||| |||||||| || | |||| ||| ||| ||| || | Sbjct 30035 GGGATGATGCCGTTGGACGTGCCGTTGGTGCCGGCAATGTACGA--GCCCGTCGCACGGA 30092 Query 149404 CTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCC 149461 ||| ||||||| |||||| ||||| ||||| ||| ||||| ||||| ||| Sbjct 30093 TGCGGTGGACGTTGAGGCCGATACCGCCGGCCGT-CTTGGAGATCATGGCGCACGTC-TT 30150 Query 149462 GAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCA 149521 |||||| |||||||||||| ||||||||| ||| ||| | || ||||||||| | Sbjct 30151 GAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGAGGA 30210 Query 149522 CATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTT 149581 || || | |||||||||| ||| | ||||| |||||| || || | || Sbjct 30211 CAGCTGGGCCTGGGGCGTGCCGGCGTTGAAAAGCGTGGGCGAGGCGTGGGTGAAGAACTT 30270 Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTAT 149641 | | ||| | ||| | ||| | || || || |||| |||||| |||||| | Sbjct 30271 GTTGGACATGTAGTTGTAGGTCTCAATGACACGTTCAATGTTATCGCCCCAGATGCCGAC 30330 Query 149642 GGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA 149701 ||||| ||||| | ||| ||||| || ||||| | | ||| | | ||||||| Sbjct 30331 AGCGACACGCATGATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGCAG 30390 Query 149702 GTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTC 149761 ||| || || |||||| | |||||||||| ||||| ||||||||| ||| | | Sbjct 30391 ATAGGAACGCTCGAGGGTCTTGAAACCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGAC 30450 Query 149762 AATGGCGGCGTC 149773 |||||| | ||| Sbjct 30451 AATGGCCGAGTC 30462 >seq16 Length=123879 Score = 179 bits (198), Expect = 4e-40 Identities = 356/519 (69%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||||||||||||||| ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 4448 CTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTC 4389 Query 120411 CATAAACTCGAACGGGTTGCT--CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| |||||| | |||| || | | ||| | ||| | |||||| Sbjct 4388 CATGAAGTCGAAGGGGTTGGTGGCGCGGTAGACCTTGTCG--TTGCCGAGGGCGACGAGC 4331 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAA 120527 || ||||| || || ||||||||||||| |||| | || | ||||||||| |||| Sbjct 4330 AGGCGGTCAGCGACGAACTCAATGTACTGCTTCATGAGGGTG-GAGTTCATGCCGAGCAG 4272 Query 120528 CGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT 120587 || |||| ||| |||| ||||||| ||| || | || || || || || Sbjct 4271 GGCGCAGGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCATCGACGATAAT 4212 Query 120588 GGCGAGCATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 | | || || || ||| |||| || | | | | | || |||||| Sbjct 4211 GTCCTCAATGACCTGCTTGCTGGGGCGGTTGT--TC-AGGTGGGA---GAAGAGCAGGCA 4158 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 |||||||| ||||||||||||||||| ||||| || ||||||||| || |||||||| Sbjct 4157 GGCAAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCC 4098 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 |||||| | || | |||||| |||| |||| || ||| |||||| ||||| | Sbjct 4097 GGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGAGGAGAAGGCGCCCGAGAAGAAGAT 4038 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 ||||| ||| || || || || | |||| ||| || || | | ||| | | ||| Sbjct 4037 ACCCTCGACGGCAGCGAAAGCAACGAGACGCTGGGCAAAGGTGGACTTCTCGTCGGTGAT 3978 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||| || ||||| |||||||| ||||| | ||| || Sbjct 3977 CCAGCGCAGAGCCCAGTCGGCCTTCTTGCGAATGCAGGG 3939 >seq67 Length=72276 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| ||| || ||| |||||||||||||||||| Sbjct 65810 GGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 65869 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || |||||||||||||| |||||||| |||||||| |||||| ||| Sbjct 65870 AGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 65929 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | ||||| || | ||||| |||||| || || || || Sbjct 65930 GACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTTTTACCCGTGAGGGT 65989 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 65990 CTTGACGAAAATCTGCAT 66007 >seq390 Length=196699 Score = 123 bits (136), Expect = 2e-23 Identities = 143/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || || ||| | | | ||||| |||||||||| Sbjct 27396 GGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 27454 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || ||||||||||| || |||||||| |||||||| |||||| || Sbjct 27455 CAGCGAAAATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 27514 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | || ||| || || | ||||| ||| |||||||| || | Sbjct 27515 TGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTAAGGG 27574 Query 133642 TTTTTACGAA 133651 | || ||||| Sbjct 27575 TCTTCACGAA 27584 >seq86 Length=56920 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || || || ||| || || | | | || || |||||||||| Sbjct 326 GGTGGACTCCTTCTGAATGTTATAGTCGGACAGGGTCCGGCCA-TCTTCCAGCTGCTTGC 268 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || ||||||||||| || |||||||| |||||||| |||||| || Sbjct 267 CAGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACT 208 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| | ||| || || | ||| | ||| ||||| || || | Sbjct 207 TGACGTTGTCAATGGTGTCGGAGCTCTCGACTTCAAGGGTAATGGTCTTGCCCGTGAGCG 148 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 147 TCTTGACGAAAATCTGCAT 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418189527680