Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq23 159 4e-34 >seq23 Length=113490 Score = 159 bits (176), Expect = 4e-34 Identities = 280/401 (70%), Gaps = 10/401 (2%) Strand=Plus/Minus Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 |||||||||||| ||| | |||||||||||||||||| |||| ||| |||||| | Sbjct 14254 CACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGCACCATTTGGGGGAGGTCCCGCG 14196 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| ||||| | || | || | | || |||| | || | || || | | Sbjct 14195 GGTTCCACGCCGACAGCAAAATGCGGCGG-TCAAAGGGTGCTTCCT--TCAGTTTGCGCA 14139 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279 | ||||| ||||||||||||||||||||| |||||| | |||| |||| Sbjct 14138 CA-ACCTCGGCGAGCTGGTCCACGCCCTGGCCCTCGTAGTCGGCGTGTGGGTCCTTGTAC 14080 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||| ||||| || | ||||||||||||||| || || || ||||||||| | | | Sbjct 14079 TCGGCACCAAAATGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGG 14020 Query 147340 TGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 | | ||||||| | | | ||| || || | || |||| | |||||||||| || Sbjct 14019 TCAGTGAAGCCCATCTGATCGAGGAAGGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 13960 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCC 147459 ||||| ||| |||| | ||| || ||| ||||||||||| || ||||| || Sbjct 13959 CCCTTTTCGGCGAGCGTGGTCGAGGTGGTCTCGCCGCGGATGAACCACAGGAGCTCTTCG 13900 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | || | | | |||||||| |||||| |||||||| || Sbjct 13899 ATGACGGCGCGCGTAAAGACCCGCTTGGTTGTCAGCAGAGG 13859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484849164800