Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq211 147 2e-30 seq67 140 3e-28 seq390 98.7 1e-15 seq86 93.3 4e-14 >seq211 Length=310440 Score = 147 bits (162), Expect = 2e-30 Identities = 852/1334 (64%), Gaps = 45/1334 (3%) Strand=Plus/Minus Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCG 7713 || || ||||| |||||||| | || ||| ||||| | | | || |||||||| Sbjct 30264 TTCACCCACGCCTCGCCCACGCTTTTCAACGCCGGCACGCCCCAGGCCCAGCTGTCCTCG 30205 Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGAT 7773 || || | | ||| || |||||||| || ||||| ||| ||||||| | || Sbjct 30204 TGCTTCCTCGTCGACATCAAGGACGACAGCATTGAGGGCATCTACGACACGCT-CAAGAC 30146 Query 7774 -TGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGCG 7831 ||||||| || ||||| ||||| ||||| || || || ||||| || | | || | Sbjct 30145 GTGCGCCATGATCTCCAAG-ACGGCCGGCGGTATCGGCCTCAACGTCCACCGCATCCGTG 30087 Query 7832 CCAACGGTAGC-CGCATCGTGTC--CACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGT 7888 | | ||| || || | || | ||||||||| | ||| ||| | |||||| Sbjct 30086 CGA-CGG--GCTCGTACATTGCCGGCACCAACGGCACGTCCAACGGCATCATCCCCATGC 30030 Query 7889 TGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGGCG 7945 |||| |||||||||||| | | || | || |||||||| || || ||| || | Sbjct 30029 TGCGTGTGTTCAATAACACTGCTCGCTACGTTGACCAGGGTGGCAACAAGCGTCCTGGTG 29970 Query 7946 CCG-CTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGT 8004 || ||| ||||| | |||||||||||||| ||| | | || | || ||||||| Sbjct 29969 CCTTCTGT-ATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTCGATCTGCGC 29911 Query 8005 CGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCC 8064 ||| || || || | || |||||||| ||| | | ||||| | || Sbjct 29910 AAGAACCACGGCAAGGAGGAGGTCCGCGCCCGCGATCTGTTCCTGGCCCTGTGGATTCCT 29851 Query 8065 GATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGT 8124 || ||||| |||| ||| || | | | | ||| ||||||||||||| | Sbjct 29850 GACCTGTTCATGAAGCGTGTCGAGAAGAATGGCGAGTGGACGCTCATGTGCCCTAACGAG 29791 Query 8125 TGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAA 8184 |||||| | || |||||| | || || ||||| || | ||||| Sbjct 29790 TGCCCTGGCCTGGCTGACTGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGAG 29731 Query 8185 CACGACGGCGCGTACGTGCGGCAAG----TGAAAGCGCGCGACCTGCACCGCGCCATTAT 8240 | || ||| || || || |||| | || || | | ||| |||||| | Sbjct 29730 AAGGAGGGC-CG--CG-GCATCAAGACCGTTAAGGCCCAGAAGCTGTGGTACGCCATCCT 29675 Query 8241 CGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAA 8300 ||| || | ||| ||||| | || | |||||||||||| ||| |||||| ||| Sbjct 29674 CGAGGCCCAGACCGAGACCGGCAACCCCTTCATGCTGTACAAGGACCACTGCAACCGCAA 29615 Query 8301 AAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACA 8360 ||||| || | ||| |||||||||| | || ||| |||||| | || ||||| | Sbjct 29614 GAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTCCAACCTGTGCACGGAGATTGTCGA 29555 Query 8361 GTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTT 8420 |||| || || || || || ||||| ||||| || || ||| || | || | Sbjct 29554 GTACTCGGCCCCTGATGAGGTCGCCGTCTGCAACCTGGCTTCGCTGGCCCT----GCCGT 29499 Query 8421 CGTTGATCGAC-GCTCAAAC---ACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAG 8476 |||| ||||| | | ||| || ||||| | | || | | | | || | Sbjct 29498 CGTTTGTCGACTACACCAACGAGGTCTATGACTTCAAGAAGCTGCACGAGGTCACCCAGG 29439 Query 8477 TGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGC 8536 | || ||||| | | |||||||| |||||||| || || ||| || || || | Sbjct 29438 TTGTTGTCCGCAACCTGAACCGCATCATCGATGTCAACTTCTACCCCGTGCCCGAGGC-C 29380 Query 8537 GCGTATCG-AACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCG 8595 | | | |||||||||||| | ||| |||| || || || || |||||||| || || Sbjct 29379 AAGAACAGCAACATGCGCCACCGCCCCATTGGTGTCGGTGTCCAGGGTCTGGCTGATGCC 29320 Query 8596 TT--TGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAA 8653 || || | ||||| | |||| ||| | || || ||| |||||||| | | Sbjct 29319 TTCCTGGC--TCTGCGCATGCCCTTCGAGTCGCCCGAGGCCCGCGAGCTCAACAAGCAGA 29262 Query 8654 TAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTC-AACTTGCCCGAGAAT-T 8711 | || || | || ||| ||| | || | ||| || || |||||| | Sbjct 29261 TCTTCGAGACCATCTACCACGCCGCCCTGACTGC--GTCGTCGGACCTGGCCGAGATTGA 29204 Query 8712 GGGCACGTACGAATCGTACGCGGGCAGCCC--TGCCAGCCGCGGAATATTGCAATACGAC 8769 |||||| ||| ||||||| ||||||||| || | || | || || |||| | |||| Sbjct 29203 GGGCACCTACTCGTCGTACGAGGGCAGCCCCGTGTC-GCAG-GGCATCCTGCAGTTCGAC 29146 Query 8770 ATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCT 8829 |||||| |||||| ||| | | | ||| | ||| || | | ||| || Sbjct 29145 ATGTGGGATGTCAAGCCGTCTGGTCTCTGGGACTGGGACGCCCTCCGTCTCAAGATCAAG 29086 Query 8830 CAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAA 8889 | |||| | ||||| ||| || ||||| ||||||||| || |||| | || Sbjct 29085 GAGCACGGTATCCGCAACAGTCTGCTGATGGCTCCCATGCCCACGGCGTCGACCTCGCAG 29026 Query 8890 ATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTG 8949 || |||| |||||||| | ||| ||||| | ||| |||| | ||| | | || ||| Sbjct 29025 ATTCTGGGCAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACCAGCGCCGTGTG 28966 Query 8950 TTGGCCGGCGATTT 8963 |||||||||| || Sbjct 28965 CTGGCCGGCGAGTT 28952 >seq67 Length=72276 Score = 140 bits (154), Expect = 3e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| || ||| ||||| || |||||||||||| | |||| | Sbjct 65790 AGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 65849 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| ||||| |||| |||||||| |||||||| ||||| || Sbjct 65850 CCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCC 65909 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||||| |||||| || || || Sbjct 65910 TTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTG 65969 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||||||||| || | || || |||||||| ||||| ||| Sbjct 65970 ATGGTTTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 66011 >seq390 Length=196699 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || ||||||||||| | |||| | Sbjct 27376 AGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGG 27435 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||||| |||||||| || || || ||||| || Sbjct 27436 CCATCCTCCAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCC 27495 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| || || || || || || || Sbjct 27496 TTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAGGGTG 27555 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 ||||| || ||||| | || || ||||| Sbjct 27556 ATGGTCTTGCCGGTAAGGGTCTTCACGAA 27584 >seq86 Length=56920 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || |||||||||||| | ||| | Sbjct 118 AGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 59 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCC 134611 || |||||||| ||||| ||||| |||| |||||||| |||||||| ||||| Sbjct 58 CCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395670848640