Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq211 268 1e-66 seq16 131 2e-25 >seq211 Length=310440 Score = 268 bits (296), Expect = 1e-66 Identities = 1124/1749 (64%), Gaps = 53/1749 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| ||||||||||| ||| |||||||| | | ||||| || Sbjct 28634 CGCAGGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTGGTG 28693 Query 117897 AACTTGGAGAGGGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | ||| || || | |||| || ||| | || || || ||||| || Sbjct 28694 ATCTTGCCCATGGTCGG-CTCACGCATGTGGATGTTGAGCGACTGCGACTGGTCGATAAA 28752 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTC 118013 || || || || ||||| | | || || | | | | ||| |||||||||||| Sbjct 28753 CGCACCACGGTCGGCGGCCATCTGCA-CA-ATTGTGCGTTGCGAGATCTCCCACACAGTC 28810 Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 |||| || ||| | ||| | ||||| | ||| || ||||| || || ||| | Sbjct 28811 TTGTACAGAGCCTTGGTCTCAGCGGGGATGTTAGGGATGTTCTGGATCGAACCGCCCTCG 28870 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 | ||| | | |||||| | | ||||| || || || | || |||| | Sbjct 28871 GCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTCGACCAGGTCCTTGAGC 28930 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 || | || || || ||||| || || || || | | | ||||| |||| | Sbjct 28931 AGCCACGGGTTCACGACCTGGAACTCGCCGGCCAGCACACGGCGCTGGTAGATGTTGGAC 28990 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||| |||||||| ||||| |||| || || | || || || ||||||||| Sbjct 28991 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTCGACGCCGTGGGCATG 29050 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA------ 118307 || ||||| || || ||||| |||| ||| | ||| | || ||||||| Sbjct 29051 GGAGCCATCAGCAGACTGTTGCGGATACCGTGCTCCTTGAT------CTTGAGACGGAGG 29104 Query 118308 GCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366 ||||||||||| || || | | || | | |||||| || ||||| ||||| || Sbjct 29105 GCGTCCCAGTCCCAGA-GACCAGACGGCTTGACATCCCACATGTCGAACTGCAGGATGCC 29163 Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 118426 || ||| | || ||||| | | | || | |||||||| ||| |||| || || Sbjct 29164 CTGCGACACGGGGCTGCCCTCGTACGACGAGTAGGTGCCCTCAATCTCGGCCAGGTCCGA 29223 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 ||| ||||| ||||| || || || || || || | || | | ||| Sbjct 29224 CGACGCAGTCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCGCGGGC 29283 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACAC 118545 |||| || || || | | || || | | || |||| || ||||| ||||||| Sbjct 29284 CTCGGGCGACTCGAAGGGCATGCG-CAGAGCCAGGAAGGCATCAGCCAGACCCTGGACAC 29342 Query 118546 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGGATAAA 118602 ||| ||||| ||||| || | ||| || ||| || ||| |||||| || | Sbjct 29343 CGACACCAATGGGGCGGTGGCGCATGTTGCTGTTCTTGGC---CTCGGGCACGGGGTAGA 29399 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | || |||||| | | || || || | ||||||| |||| || || |||| Sbjct 29400 AGTTGACATCGATGATGCGGTTCAGGTTGCGGACAACAACCTGGGTGACCTCGTGCAGCT 29459 Query 118663 TTTCGTAATCAAA-ACTGCGA--GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 118719 | | | | ||| | || || || | || |||| || || ||||| | || | Sbjct 29460 TCTTGAAGTCATAGACCTCGTTGGTGTAGTC---GACAAACGACGGCAGGGCCAGCGAAG 29516 Query 118720 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 |||| || || || | | |||||| | | |||||| | ||| |||||||||| || Sbjct 29517 CCAGGTTGCAGACGGCGACCTCATCAGGGGCCGAGTACTCGACAATCTCCGTGCACAGGT 29576 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | || || |||||||||| |||||| || || ||| ||| || ||||||| Sbjct 29577 TGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGT 29636 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCG 118898 | |||||| | || | || ||||| || |||| || ||| || || | ||| | | || Sbjct 29637 ACAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCT 29696 Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958 | || || || | || | || ||||| | |||||||||| ||| || || || Sbjct 29697 GGGCCTTA-ACGGTCTTGATGCCGCGGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCG 29755 Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 119018 ||||| ||||| | || | || || || || | ||||| | ||| | ||| Sbjct 29756 AACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGCGTCCAC 29815 Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGA 119078 | ||| || ||| || ||||||||||| ||||| || ||||| || ||| ||| ||| Sbjct 29816 TCGCCATTCTTCTCGACACGCTTCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGA 29875 Query 119079 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 119138 || || ||| | || || | || || || |||| || | || || | || Sbjct 29876 TCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGATCGAGGAACTCGAAGACG 29935 Query 119139 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCC 119192 || ||||||||||| || ||||| | || | || | |||| ||| || Sbjct 29936 TCGGCGTGCCACGGCTCGAGGTAGATACAGAAGGCACC---AGGACGCTTGTTGCCACCC 29992 Query 119193 TGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGAT 119252 |||| || || | |||||| || || ||||| ||||| || ||||| || | ||| Sbjct 29993 TGGTCAACGTAGCGAGCAGTGTTATTGAACACACGCAGCATGGGGATGATGCCGTTGGAC 30052 Query 119253 TGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310 ||| || || || || |||||| | | || | || ||||| || | | Sbjct 30053 GTGCCGTTGGTGCCGGCAATGTACGAGCC--CGTCGCACGGATGCGGTGGACGTTGAGGC 30110 Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370 | ||||| || ||| ||| ||||| |||||| | |||| || ||||||| || | Sbjct 30111 CGATACCGCCGGCCGTCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCT 30170 Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTA 119429 | || ||| |||| | ||| ||||||||| |||| || ||||| ||| || Sbjct 30171 CAATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGAGGACAGCTG-GGCCTGGGGCGTG 30229 Query 119430 CCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTA 119488 || |||||||| || || || | |||||| |||| | || | | |||||| | || ||| Sbjct 30230 CCGGCGTTGAAAAGCGTGGGCGAGGCGTGGGTGAAGA-ACTTGTTGGACATGTAGTTGTA 30288 Query 119489 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548 |||||| | ||| ||||| || || || |||| | ||| ||||| | ||| Sbjct 30289 GGTCTCAATGACACGTTCAATGTTATCGCCCCAGATGCCGACAGCGACACGCATGATCAT 30348 Query 119549 GTATTGGGG 119557 || ||||| Sbjct 30349 GTGCTGGGG 30357 >seq16 Length=123879 Score = 131 bits (144), Expect = 2e-25 Identities = 302/450 (67%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 || || || || ||||||||||||||||| ||||| ||| || ||| ||| |||||||| Sbjct 4444 TACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCG-CCGAGCGAGATGTTCTCCAT 4386 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGAC 129845 || || || ||||| | | | | | || | | || | ||| || | Sbjct 4385 GAAGTCGAAGGGGTTGGTGGCGCGGTAGACCT-TGTCGTTGCCGAGGGCGACGAGCAGGC 4327 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | |||| |||||||||||| ||| ||||||||| |||| ||| | Sbjct 4326 GGTCAGCGACGAACTCAATGTACTGCTTCATGAGGGTGGAGTTCATGCCGAGCAGGGCGC 4267 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || || || || || |||| ||| ||| || | || || || | ||| | | Sbjct 4266 AGGGCAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCATCGACGATAATGTCCT 4207 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 |||| || | ||| || | ||| || |||||| |||||| || Sbjct 4206 CAATGACCTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGAAGAGCAGGCAGGCAAAGTCGG 4147 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| || ||||||||||| |||||||| || || |||||| ||| || ||||| |||| Sbjct 4146 TGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGAC 4087 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | |||||| || | | || | ||| ||||||||||| ||||| || Sbjct 4086 CGCGCTTCTTGAGCCAGAAGATGGAGGAGAAGGCGCCCGAGAAGAAGATACCCTCGACGG 4027 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| |||||||| ||||||| Sbjct 4026 CAGCGAAAGCAACGAGACGCTGGGCAAAGG 3997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431860449920