Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq23 134 1e-26 >seq23 Length=113490 Score = 134 bits (148), Expect = 1e-26 Identities = 191/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247 ||||| ||||| ||| ||| |||||| || |||| ||||||| || || ||| Sbjct 14127 AGCTGGTCCACGCCCTGGCCCTCGTAGTCGGCGTGTGGGTCCTTGTACTCGGCACCAAAA 14068 Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307 || | ||||||||| ||||| || || || ||||| || ||||| | || ||||||| Sbjct 14067 TGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGGTCAGTGAAGCCC 14008 Query 30308 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAG 30367 ||| || | ||| | | || |||||| ||||||||||||| || ||||| || | | Sbjct 14007 ATCTGATCGAGGAAGGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTTTTCGGCG 13948 Query 30368 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30427 ||| | ||| | || || | || ||||||||| ||||| || | |||||| | Sbjct 13947 AGCGTGGTCGAGGTGGTCTCGCCGCGGATGAACCACAGGAGCTCTTCGATGACGGCGCGC 13888 Query 30428 CAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||||||| |||||| || || || || Sbjct 13887 GTAAAGACCCGCTTGGTTGTCAGCAGAGG 13859 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 29823 TGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTT 29882 |||| ||| | || || || || | | ||| | | ||| ||||| |||| ||| | | Sbjct 14564 TGTTGATCTTGAGCGTTGGGAACGCCCGGGGAACACGCTCCAGCTGTGTCTCCAGAGCGT 14505 Query 29883 CCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTA 29942 | |||| ||| ||||||||| ||||| |||| | ||| || || || | | Sbjct 14504 CGACGTGATCGGCGTAGACGTGCGCGTCGCCCATGACATGGGTCAAGGAGCCGGGGACGA 14445 Query 29943 GCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTA 30002 | | ||| | |||| ||||| || || |||| ||| || ||||| ||||| | Sbjct 14444 GGTTGCAGACACGGGCCAGCATGTGTGTCAGCAGAGCGTACGAAGCAATGTTGAAGGGCA 14385 Query 30003 CCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 | ||||| |||||||| | |||| |||||||||||| || Sbjct 14384 CGCCGAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 14345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308260775744