Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq23 104 2e-17 >seq23 Length=113490 Score = 104 bits (114), Expect = 2e-17 Identities = 192/279 (69%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCC 34380 ||| || ||||||||||||| |||| || || | ||| || || || ||| ||| | Sbjct 13957 GGGCGTCAAGATCTGGGACGGCAACGGCTCGCGCGCCTTCCTCGATCAGATGGGCTTCAC 14016 Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 || || || |||||| | ||||| |||||||| ||||||||| | || ||||| || Sbjct 14017 TGACCGCGAAGACGGCGACCTCGGCCCCGTCTACGGCTTCCAGTGGCGCCATTTTGGTGC 14076 Query 34441 GGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACG 34499 ||||| || | || ||||| ||| ||||| | ||||||||| || | Sbjct 14077 CGAGTACAAGGACCCACACGCCGACTACGAGGGCCAGGGCGTGGACCAGCTCGCCGAGGT 14136 Query 34500 TGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACC 34559 || || | || | | | ||||| |||| | | || || ||| |||||||||| Sbjct 14137 TGTGCGCAAACTGAAGGAAGCACCCT-TTGACCGCCGCATTTTGCTGTCGGCGTGGAACC 14195 Query 34560 CGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 || ||| ||||| | |||| ||| || |||||||||| Sbjct 14196 CGCGGGACCTCCCCCAAATGGTGCTGCCGCCGTGCCACA 14234 Score = 104 bits (114), Expect = 2e-17 Identities = 192/279 (69%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||||||||| || ||| |||| | ||||| ||| |||||||||||| ||| || | Sbjct 14234 TGTGGCACGGCGGCAGCACCATTTGGGGGAGGTCCCGCGGGTTCCACGCCGACAGCAAAA 14175 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCT 6865 | | | |||| ||||| | | | || | || || | || ||||||||| | Sbjct 14174 TGCGGCGGTCAA-AGGGTGCTTCCTTCAGTTTGCGCACAACCTCGGCGAGCTGGTCCACG 14116 Query 6866 CCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925 ||||| ||| ||||| || | || ||||| || ||||| || | ||||||| Sbjct 14115 CCCTGGCCCTCGTAGTCGGCGTGTGGGTCCTTGTACTCGGCACCAAAATGGCGCCACTGG 14056 Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGA 6985 || |||||||| ||||| | |||||| || || || | ||| ||| || || || Sbjct 14055 AAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGGTCAGTGAAGCCCATCTGATCGAGG 13996 Query 6986 AAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 ||| | || || |||| ||||||||||||| || ||| Sbjct 13995 AAGGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 13957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259979383040