Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq67 93.3 3e-14 >seq67 Length=72276 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || ||||| ||||| || || || || || || ||| || || |||| || |||||| Sbjct 66010 AAGATGCAGATTTTCGTCAAGACCCTCACGGGTAAAACCATCACCCTTGAGGTGGAAAGC 65951 Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||||| || ||||| ||||| || || ||||| || || | ||| | Sbjct 65950 TCCGACACCATCGACAAT--GTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCCG 65893 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || | || ||||| || || || | || |||| |||| | ||||||| | Sbjct 65892 ACCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACT 65833 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || |||||||| |||| |||| |||| ||||||| || Sbjct 65832 ACAACATCCAGAAGGAGAGCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 65781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860526384464