Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq67 89.7 3e-13 seq86 86.0 4e-12 >seq67 Length=72276 Score = 89.7 bits (98), Expect = 3e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| ||||| ||||| || || || || | Sbjct 66010 AAGATGCAGATTTTCGTCAAGACCCTCACGGGTAAAACCATCACCCTTGAGGTGGAAAGC 65951 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| || || | ||||| || Sbjct 65950 TCCGACACCATCGACAATGTCAAGTC-GAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 65892 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || ||||| ||||| || || || |||| ||||| | ||| || Sbjct 65891 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTA 65832 Query 23787 CAACATACAAAAAGAG 23802 |||||| || || ||| Sbjct 65831 CAACATCCAGAAGGAG 65816 >seq86 Length=56920 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || |||||||| || || || || || ||||| || | | Sbjct 129 ATGCAGATTTTCGTCAAGACGCTCACGGGCAAGACCATTACCCTTGAAGTCGAGAGCTCC 188 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | ||||| || || Sbjct 189 GACACCATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 248 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| ||||| || |||||||| | || || | ||| || ||| Sbjct 249 CAGCGCCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGGACCCTGTCCGACTATAAC 308 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 309 ATTCAGAAGGAGTCCAC 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007820379456