Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq23 116 3e-21 >seq23 Length=113490 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||| | ||||||||| ||||| || || || ||||| || ||||| | || |||| Sbjct 14070 AAATGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGTCTTCGCGGTCAGTGAAG 14011 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||| || | ||| | | || |||||| ||||||||||||| || ||||| ||| Sbjct 14010 CCCATCTGATCGAGGAAGGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTTTTCG 13951 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 | |||| | ||| | || || | || ||||||||| ||||| || | |||||| Sbjct 13950 GCGAGCGTGGTCGAGGTGGTCTCGCCGCGGATGAACCACAGGAGCTCTTCGATGACGGCG 13891 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | |||||||| |||||| || || || || Sbjct 13890 CGCGTAAAGACCCGCTTGGTTGTCAGCAGAGG 13859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161061550752