Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq211 109 8e-19 >seq211 Length=310440 Score = 109 bits (120), Expect = 8e-19 Identities = 394/607 (65%), Gaps = 16/607 (3%) Strand=Plus/Plus Query 76541 TCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACC 76600 ||| ||| ||||| || || || || ||||| | | |||||| |||| | || || Sbjct 29774 TCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGCGTCCACTCGCCATTCTTCTCGACA 29833 Query 76601 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCT 76660 || ||||| || || ||||| ||||| || || | || ||||| |||| | || Sbjct 29834 CGCTTCATGAACAGGTCAGGAATCCACAGGGCCAGGAACAGATCGCGGGCGCGGACCTCC 29893 Query 76661 TCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCT 76720 || || || ||||| ||||| |||||||| | | || | ||||| || || Sbjct 29894 TCCTTGCCGTGGTTCTTGCGCAGATCGAGGAACTCGAAGACGTCGGCGTGCCACGGCTCG 29953 Query 76721 AGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAG 76778 || || || || || |||| || || || || || ||||| || | || | |||| Sbjct 29954 AGGTAGATA--CAGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAG 30011 Query 76779 TGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAA 76838 ||||||| | || | || ||| || || |||||||| || || || || || || | || Sbjct 30012 TGTTATTGAACACACGCAGCATGGGGATGATGCCGTTGGACGTGCCGTTGGTGCCGGCAA 30071 Query 76839 TATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAG 76898 | || || ||||| || | ||||| || || || ||| | || | Sbjct 30072 TGTACGAGCCCGTCGCACGGATGCGGTGGACGTTGAGGCCGATACCGCCGGCCGTCTTGG 30131 Query 76899 AGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATG 76957 |||| | || || ||| || | ||||| ||||||||||| || || || ||| | ||| Sbjct 30132 AGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTGATG 30190 Query 76958 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGA 77017 | | || || || |||| || || || || || || || | || || Sbjct 30191 TCGACGAGGAAGCACGAGGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAAAGCGTGGGC 30250 Query 77018 GATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTA- 77075 || || || ||||| | || | || | |||| ||||| || ||||| || ||| | Sbjct 30251 GAGGCGTGGGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAATGACACGTTCAAT 30309 Query 77076 --TATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTA 77132 |||| || |||| || |||||||||||||| | ||| ||||| || || || | Sbjct 30310 GTTATCGCCCCAGATG----CCGACAGCGACACGCATGATCATGTGCTGGGGACGCTCGA 30365 Query 77133 CAGTCTT 77139 | |||| Sbjct 30366 CGATCTT 30372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930550154240