Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq67 178 3e-39 seq86 152 1e-31 seq390 143 6e-29 seq16 95.1 3e-14 >seq67 Length=72276 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | ||||| || || |||||||||||||| | Sbjct 65780 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 65839 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || || |||||||||| || || ||||| ||| Sbjct 65840 CAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGG 65899 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| ||||| || ||| || Sbjct 65900 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGAGCTTTCCAC 65959 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| || |||||||| | ||||| ||||| |||||||| || Sbjct 65960 CTCAAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 66010 >seq86 Length=56920 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || ||||| || | ||| || || || ||||| ||||| | Sbjct 355 CCGCCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGAC 296 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || || || || || |||||||||| || || |||||| ||| Sbjct 295 AGGGTCCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGCGGG 236 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||||||||| |||||||| | || ||| | || || |||| || |||| ||||| Sbjct 235 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATGGTGT-CGGAGCTCTCGAC 177 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| ||||| | ||||| ||||| |||||||| Sbjct 176 TTCAAGGGTAATGGTCTTGCCCGTGAGCGTCTTGACGAAAATCTGCAT 129 Score = 105 bits (116), Expect = 1e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 128 ACCACCACGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 69 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || |||||||||| || || ||||| ||| Sbjct 68 CAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGG 9 Query 282992 AATACCCT 282999 || |||| Sbjct 8 GATGCCCT 1 >seq390 Length=196699 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||||||| || ||||| || | || || || |||||||||||||| | Sbjct 27366 ACCACCGCGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 27425 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || || |||| || || ||||| || Sbjct 27426 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCTGGGGG 27485 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 27486 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 27545 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || ||||| ||||| || || | ||||| ||||| Sbjct 27546 CTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACGAA 27584 >seq16 Length=123879 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||| || | || ||| || |||||||||| | |||||| Sbjct 4240 AGGAGTTCCTCACCGAGGCCCTGCCCTGCGCCCTGCTCGGCATGAACTCCACCCTCATGA 4299 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||| || || || ||||| ||||| || | |||| || || || |||| || || | Sbjct 4300 AGCAGTACATTGAGTTCGTCGCTGACCGCCTGCTCGTCGCCCTCGGCAACGACAAGGTCT 4359 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | | ||| |||||||||| || |||||| ||| || ||| || || || |||| Sbjct 4360 ACCGCGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACT 4419 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||| ||| |||| || || | | ||||||| Sbjct 4420 TCTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGCCGGTGT 4459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733406298528