Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq769 179 4e-40 seq224 91.5 2e-13 >seq769 Length=2557781 Score = 179 bits (198), Expect = 4e-40 Identities = 566/861 (66%), Gaps = 26/861 (3%) Strand=Plus/Plus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 || |||||||| | ||| || || | | || || || ||||| || || || |||||| Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 |||||||| | || | || | || | |||||| || || ||||| ||| Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGA 972015 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 || || || | | | ||||| |||||||| || | ||| |||| | | ||||| Sbjct 972016 TCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGG 972075 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 || ||||| || ||||| || | ||||||||| ||||| || | || | | ||| || Sbjct 972076 CGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGG 972135 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 54293 | | ||| ||||||| || ||||| |||| || || ||| | |||||||| Sbjct 972136 ACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGG 972195 Query 54294 TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353 | ||| ||||| || || || ||||| || ||||| | || || || | | Sbjct 972196 TGGACGTTG--AGACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 972253 Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413 | || || || || || || || |||||| |||||| | || || ||| |||| | Sbjct 972254 TGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCT 972313 Query 54414 GGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 54472 || ||| | ||| ||||||||||| | ||| || ||||| ||||| || | || Sbjct 972314 GG-GACTGGGGAGTGCCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTC 972372 Query 54473 GAAAGTAGATTGTACGTCTCGAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTA 54527 || | || ||||| ||||| || ||| || | | |||| |||| || | Sbjct 972373 GACATGAGGTTGTAGGTCTCAATGACACGCTCGATGTTGTCTCCC-CAGATG----CCGA 972427 Query 54528 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCA 54587 | || |||||||| | ||||||||| || | || ||||||||| || | || || | Sbjct 972428 CAGCAACACGCATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAA 972487 Query 54588 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 54645 ||| || || | || || || ||||| || | ||| ||||| || || ||||| Sbjct 972488 GGTATGAGCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAA--TCGCGATCGTA 972545 Query 54646 AATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGA 54705 | ||| | |||| | || ||||| | | | || || ||| | | ||||| Sbjct 972546 GACAATGGCCGAGTCCAATTCTTCCTTGTGCCTCATGAC-GCACTCAT-ATGTTTCTTGA 972603 Query 54706 --AATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATC 54763 || || || ||| ||| | |||||||| |||||||||| | || || | || Sbjct 972604 GCGATCATGGGCGAAGCTTTGCTGTTTTTAGGGTTGACATAGTGGTACAAGTCGCTGATG 972663 Query 54764 ACTTCACTA-AATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGC 54822 || || | || | ||||| || | ||||| || ||||| ||||| || | |||||| Sbjct 972664 AC-AGACGACCATTGCTTTTTGGTCTGCTTGTGGAGGTTTGACACGGCAATGCGAGCGGC 972722 Query 54823 TAGAATGGCATAATCCGGATG 54843 ||| |||||||| || || || Sbjct 972723 TAGGATGGCATAGTCGGGGTG 972743 >seq224 Length=800728 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || |||||||| ||| ||||| ||||| | | || | |||||||| || || || Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGC---TGTCATGT 24311 || || || || || || ||||||| || | | || | || | |||| || Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTT 24340 |||||| |||||| ||||||||||| Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593710957540320