Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq769 179 4e-40
seq224 91.5 2e-13
>seq769
Length=2557781
Score = 179 bits (198), Expect = 4e-40
Identities = 566/861 (66%), Gaps = 26/861 (3%)
Strand=Plus/Plus
Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055
|| |||||||| | ||| || || | | || || || ||||| || || || ||||||
Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955
Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115
|||||||| | || | || | || | |||||| || || ||||| |||
Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGA 972015
Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175
|| || || | | | ||||| |||||||| || | ||| |||| | | |||||
Sbjct 972016 TCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGG 972075
Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235
|| ||||| || ||||| || | ||||||||| ||||| || | || | | ||| ||
Sbjct 972076 CGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGG 972135
Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 54293
| | ||| ||||||| || ||||| |||| || || ||| | ||||||||
Sbjct 972136 ACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGG 972195
Query 54294 TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353
| ||| ||||| || || || ||||| || ||||| | || || || | |
Sbjct 972196 TGGACGTTG--AGACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 972253
Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413
| || || || || || || || |||||| |||||| | || || ||| |||| |
Sbjct 972254 TGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCT 972313
Query 54414 GGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 54472
|| ||| | ||| ||||||||||| | ||| || ||||| ||||| || | ||
Sbjct 972314 GG-GACTGGGGAGTGCCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTC 972372
Query 54473 GAAAGTAGATTGTACGTCTCGAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTA 54527
|| | || ||||| ||||| || ||| || | | |||| |||| || |
Sbjct 972373 GACATGAGGTTGTAGGTCTCAATGACACGCTCGATGTTGTCTCCC-CAGATG----CCGA 972427
Query 54528 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCA 54587
| || |||||||| | ||||||||| || | || ||||||||| || | || || |
Sbjct 972428 CAGCAACACGCATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAA 972487
Query 54588 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 54645
||| || || | || || || ||||| || | ||| ||||| || || |||||
Sbjct 972488 GGTATGAGCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAA--TCGCGATCGTA 972545
Query 54646 AATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGA 54705
| ||| | |||| | || ||||| | | | || || ||| | | |||||
Sbjct 972546 GACAATGGCCGAGTCCAATTCTTCCTTGTGCCTCATGAC-GCACTCAT-ATGTTTCTTGA 972603
Query 54706 --AATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATC 54763
|| || || ||| ||| | |||||||| |||||||||| | || || | ||
Sbjct 972604 GCGATCATGGGCGAAGCTTTGCTGTTTTTAGGGTTGACATAGTGGTACAAGTCGCTGATG 972663
Query 54764 ACTTCACTA-AATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGC 54822
|| || | || | ||||| || | ||||| || ||||| ||||| || | ||||||
Sbjct 972664 AC-AGACGACCATTGCTTTTTGGTCTGCTTGTGGAGGTTTGACACGGCAATGCGAGCGGC 972722
Query 54823 TAGAATGGCATAATCCGGATG 54843
||| |||||||| || || ||
Sbjct 972723 TAGGATGGCATAGTCGGGGTG 972743
>seq224
Length=800728
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| |||||||| ||| ||||| ||||| | | || | |||||||| || || ||
Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|||||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||
Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGC---TGTCATGT 24311
|| || || || || || ||||||| || | | || | || | |||| ||
Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTT 24340
|||||| |||||| |||||||||||
Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593710957540320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |