Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq224 214 2e-50 seq549 163 3e-35 seq1102 132 5e-26 seq658 129 6e-25 >seq224 Length=800728 Score = 214 bits (236), Expect = 2e-50 Identities = 319/450 (71%), Gaps = 2/450 (0%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | || |||||| | || || || |||| | |||| | Sbjct 538216 AGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTCCTCCTTTGCTCAGCGTC 538157 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || |||||||| ||||| ||||| ||||||| ||| || ||| |||| || | Sbjct 538156 TCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCCATCTTCT 538097 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || || |||||||| ||||| ||| ||||||||||||||| | | Sbjct 538096 GGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 538037 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||| ||||| || || || ||||| |||| ||| || || ||| || || | Sbjct 538036 ACGAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTTCTCCCACCTGAAGCACCGCCCCA 537977 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || || |||| ||||||||||| ||||||| || ||| | ||||||||| ||| | | Sbjct 537976 GCAAGGAGCGCATCAGGGAGATCATCACCGATGCCGTCACTATCGAGCAGGAATTCTTGA 537917 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 |||| || || || |||| |||||||| | || | | |||| ||| |||||| Sbjct 537916 CCGAGGCCCTTCC-CTGCGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACATC 537858 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 ||||||||||| || | ||||| ||| ||| | | |||| |||||| || Sbjct 537857 GAGTTCGTCGCTGATCGTCTGCTCATCGCCTTGGGCAATGACAAGGTCTACAAGGTCTCC 537798 Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCC 117430 ||||| | ||||| ||| | ||||||| Sbjct 537797 AACCCCTTCGACTTCATGGAGAACATCTCC 537768 Score = 165 bits (182), Expect = 8e-36 Identities = 191/257 (74%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||| || | || || Sbjct 538623 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAAGAAATTGATCTC 538564 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||| ||| | ||| | | ||| ||||| | ||| | | Sbjct 538563 TCCAAGGACATGCACGATTGGAACAACCGCCTCACCGATGACGAGAAGTACTTCGTGTCG 538504 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | |||||||| ||||||||| || || ||||||||||||||||| |||||||| Sbjct 538503 CACATCCTGGCCTTCTTCGCCGCCTCAGATGGTATCGTCAACGAGAATCTCGTCGAGCGA 538444 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | ||||||| || |||||||||||||| |||||| ||| Sbjct 538443 TTCAGCGGCGAGGTTCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 538384 Query 116873 GAGAACGTGCACTCGGA 116889 |||||| | ||||| || Sbjct 538383 GAGAACATTCACTCCGA 538367 >seq549 Length=514063 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||||||||| ||||||||| | || || || | Sbjct 328559 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCT 328500 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | ||||| || || | ||||| ||||||||||| | ||| Sbjct 328499 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 328440 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 328439 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 328380 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| |||| ||||| || ||| |||| || | ||||| Sbjct 328379 AACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGTCTGCGTGGCGG 328330 >seq1102 Length=1535874 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40695 AATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAG 40754 |||| | || || || | || ||||||||||||||| | || ||||| | |||| | Sbjct 933849 AATAGTTGTCAAGACCTTGACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATAC 933790 Query 40755 CGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAAC 40813 | | | |||| ||||| || || | ||||| |||||||| || | |||||||| | Sbjct 933789 CATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGC 933731 Query 40814 GACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 40873 | || |||| ||| ||||| ||||| || |||| |||||||| |||||||||||||| Sbjct 933730 GTCTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCC 933671 Query 40874 AGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| |||| ||||| || || Sbjct 933670 AGAAGGAGTCCACCCTGCACCTCGT 933646 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || |||||||||||||| | || || || | | | Sbjct 933398 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC 933339 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| || ||| | ||||| Sbjct 933338 GACACCATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCA 933280 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| |||||||| ||| |||| || | |||||| || | |||||| || Sbjct 933279 GCAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATAA 933220 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||| || || || || Sbjct 933219 CATCCAGAAGGAGAGCACTCTCCACCTCGT 933190 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||||||||| ||||| || |||||| | || ||||| | | Sbjct 933626 ATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCA 933567 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| || |||| || || || ||||| || | |||||| Sbjct 933566 GACACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 933507 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || ||||| || |||| || || | | |||||||||| Sbjct 933506 CAGCGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAAC 933447 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || |||||||| |||| ||||| || ||| Sbjct 933446 ATTCAGAAGGAATCCACCCTGCACCTGGTG 933417 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 |||||||| ||||||||| | || ||||| | |||| | | | | | | ||| Sbjct 934111 ACGGGCAAGACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAATGTGAAGTCG 934052 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || || | || || |||||||| || | |||||||| || || |||| ||| ||||| Sbjct 934051 AAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933992 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 || || || || | || ||||| |||||||||||||||||||||| |||| || ||| Sbjct 933991 CAACTCGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 933932 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 || || | ||| || | || || Sbjct 933931 CTCGTTCTTCGCCTGCGAGGTGG 933909 >seq658 Length=2797339 Score = 129 bits (142), Expect = 6e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| || || | |||||| | | Sbjct 1468437 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 1468378 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| | |||||||| || || Sbjct 1468377 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTG 1468318 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||||| || |||| || ||||| ||||||||||||||||||| Sbjct 1468317 ATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAAG 1468258 Query 40879 G 40879 | Sbjct 1468257 G 1468257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515209964695840