Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq549 120 3e-22 seq1102 114 1e-20 seq658 105 8e-18 >seq549 Length=514063 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| |||| ||| |||||| || || ||||| || | || || || | Sbjct 328341 ACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 328400 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || || ||||||||||||| ||| | || |||||| Sbjct 328401 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 328460 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| || ||||| || | ||||| Sbjct 328461 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGAT 328520 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||| |||||||| || ||||| || || || ||||| || Sbjct 328521 GGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559 >seq1102 Length=1535874 Score = 114 bits (126), Expect = 1e-20 Identities = 148/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || || || || |||||| ||| | || || | |||||| || Sbjct 933202 GTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTGCCC 933261 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105 || || || | ||||||||||| | || | | |||||||||| ||| | || | || Sbjct 933262 GCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCC-TGAATCTTGCTCTT 933320 Query 43106 GAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 || ||| | | | ||||||||||| || || || | |||||||||||||| || || | Sbjct 933321 GA-CGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGTCAGGG 933379 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| |||||||| ||||| Sbjct 933380 TCTTGACAAAGATCTGCAT 933398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| |||| ||| ||||| ||||| ||||| || || || || | Sbjct 933411 ACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCC 933470 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| ||||| || || || ||||||||||| | || | || ||||| Sbjct 933471 GTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTT 933530 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| | || | ||||| | | | |||||| || || || || | |||| Sbjct 933531 ATCC-TGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGA 933589 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || ||||| || || ||||| ||||| Sbjct 933590 TTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || ||||| || | || || || |||| || |||||| Sbjct 933652 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTGC 933711 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| || || ||||||||||| | || | || |||||||||| ||| || Sbjct 933712 TTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 933771 Query 43101 TGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 |||| ||| | | | || || |||| || || || | |||||||||||||| Sbjct 933772 GACTTGA-CGTTGTCGATGGTATCGGAGCTC---TCGACCTCAAGGGTGATGGTTTTGCC 933827 Query 43157 CGTTAGCGTCTTTACAA 43173 || | ||||| |||| Sbjct 933828 GGTCAAGGTCTTGACAA 933844 >seq658 Length=2797339 Score = 105 bits (116), Expect = 8e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || | ||| || || |||| || |||||||| ||||| || | Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1468376 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||| ||| ||||| |||| |||||||| |||||||| || ||||| || | Sbjct 1468377 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 1468436 Query 43174 A 43174 | Sbjct 1468437 A 1468437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807350169520