Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq549 120 3e-22
seq1102 114 1e-20
seq658 105 8e-18
>seq549
Length=514063
Score = 120 bits (132), Expect = 3e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| ||||| |||| ||| |||||| || || ||||| || | || || || |
Sbjct 328341 ACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 328400
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||| || ||||| || || ||||||||||||| ||| | || ||||||
Sbjct 328401 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 328460
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|||| ||| || |||| | | | ||||| || ||||| || | |||||
Sbjct 328461 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGAT 328520
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
||| |||||||| || ||||| || || || ||||| ||
Sbjct 328521 GGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559
>seq1102
Length=1535874
Score = 114 bits (126), Expect = 1e-20
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046
||||||||||| || || || || || |||||| ||| | || || | |||||| ||
Sbjct 933202 GTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTGCCC 933261
Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105
|| || || | ||||||||||| | || | | |||||||||| ||| | || | ||
Sbjct 933262 GCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCC-TGAATCTTGCTCTT 933320
Query 43106 GAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164
|| ||| | | | ||||||||||| || || || | |||||||||||||| || || |
Sbjct 933321 GA-CGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGTCAGGG 933379
Query 43165 TCTTTACAAAGATTTGCAT 43183
|||| |||||||| |||||
Sbjct 933380 TCTTGACAAAGATCTGCAT 933398
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | ||||| |||| ||| ||||| ||||| ||||| || || || || |
Sbjct 933411 ACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCC 933470
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||| ||||| || || || ||||||||||| | || | || |||||
Sbjct 933471 GTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTT 933530
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| ||| | || | ||||| | | | |||||| || || || || | ||||
Sbjct 933531 ATCC-TGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGA 933589
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || ||||| || ||||| || || ||||| |||||
Sbjct 933590 TTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Score = 84.2 bits (92), Expect = 3e-11
Identities = 139/197 (71%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040
|||| ||| |||||| || || ||||| || | || || || |||| || ||||||
Sbjct 933652 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTGC 933711
Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100
|| || ||||| || || ||||||||||| | || | || |||||||||| ||| ||
Sbjct 933712 TTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 933771
Query 43101 TGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156
|||| ||| | | | || || |||| || || || | ||||||||||||||
Sbjct 933772 GACTTGA-CGTTGTCGATGGTATCGGAGCTC---TCGACCTCAAGGGTGATGGTTTTGCC 933827
Query 43157 CGTTAGCGTCTTTACAA 43173
|| | ||||| ||||
Sbjct 933828 GGTCAAGGTCTTGACAA 933844
>seq658
Length=2797339
Score = 105 bits (116), Expect = 8e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || | ||| || || |||| || |||||||| ||||| || |
Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1468376
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | |||||| ||| ||||| |||| |||||||| |||||||| || ||||| || |
Sbjct 1468377 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 1468436
Query 43174 A 43174
|
Sbjct 1468437 A 1468437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571807350169520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |