Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq549 132 3e-26 seq1102 118 7e-22 seq658 111 1e-19 >seq549 Length=514063 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | |||||||||||| | || || ||||| |||||||||||||| Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| || || |||||||||||| || Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || || || Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 328509 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| ||||| ||||| || || || || ||||||||| Sbjct 328510 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATC 328557 >seq1102 Length=1535874 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 |||||| || || | || || ||||| | ||| || || ||||| ||||| |||||| Sbjct 933171 TCCGCCACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCT 933230 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| || | || |||||||||||||| || || || | ||||||||||| ||| Sbjct 933231 CAGAGTGCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGG 933290 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | | | | || | ||| |||| || || Sbjct 933291 AATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAAC 933350 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||||||||| || || || || |||||||||||||| Sbjct 933351 CTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 933398 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || ||| ||||| |||||||||||| || ||| |||| Sbjct 933415 AGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCT 933474 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || || || || || ||||||||||| || | || ||||| || Sbjct 933475 TCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 933534 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| || | || | | |||| || | || ||||| |||| ||||| || Sbjct 933535 TGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTC 933594 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| ||||| || ||||||||||| Sbjct 933595 TTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| |||| || | ||||||||| ||||| Sbjct 933664 TCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAG 933723 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | || ||||||||| ||||| ||| | | | Sbjct 933724 ATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 933783 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||||| ||||| || | ||||||||||||||||| | || || ||| Sbjct 933784 TCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACA 933843 Query 34379 A 34379 | Sbjct 933844 A 933844 Score = 86.0 bits (94), Expect = 4e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| |||| | || || | |||||||| ||||| Sbjct 933945 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAG 934004 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | || |||||| || ||||| ||| | || | Sbjct 934005 ATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTG 934064 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGT 34365 | || | ||||| ||||| || | |||||||| ||||| || Sbjct 934065 TCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTCTTGCCCGT 934111 >seq658 Length=2797339 Score = 111 bits (122), Expect = 1e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| ||||||||||||||||| ||| |||| || | ||||||||| || || || Sbjct 1468259 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATC 1468318 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 1468319 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1468378 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | |||| ||| || || || | |||||||| ||||| ||||| || ||||| || Sbjct 1468379 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 1468437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323066353711040