Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq880 107 4e-18 >seq880 Length=2175777 Score = 107 bits (118), Expect = 4e-18 Identities = 265/400 (66%), Gaps = 24/400 (6%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||| || |||| ||| |||||||||| ||||| ||||| ||||| || | |||| Sbjct 576618 CTTCCGCACATGCTCTTCTACGGTCCTCCGGGAACCGGCAAAACGTCCACTGTGTTGGCT 576677 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||| | ||| ||| | || |||| || || |||||||| || || Sbjct 576678 CTTGCCAAAGAATTGTACGGCCCTGAGATGATGAAGTCACGAGTTCTCGAGCTCAATGCC 576737 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGA----- 254175 |||||||| || || | | |||||||||| || |||||| ||| | || || Sbjct 576738 TCTGACGAGCGTGGCATTTCCATCGTCCGCGAGAAAGTCAAGAATTT-TGCACGAATGCA 576796 Query 254176 --TGTCGATTTCGTCGTTC-----CAACCCGG-------CTGTCCGCCTTTCAAGCTCGT 254221 || | | | || || | ||| | | ||| ||||| |||||| || | Sbjct 576797 ATTGACAAATCCGACGCCCTCCTACAAGCAGAAATACCCCTGCCCGCCCTTCAAGATCAT 576856 Query 254222 GATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGAT 254281 || || ||||| || || | ||||| ||||| || ||||| || ||||| || Sbjct 576857 CATTCTCGACGAAGCCGATTCTATGACACAAGACGCCCAAAGTGCCCTGCGACGAACAAT 576916 Query 254282 GGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT--GTCGAAGATC 254339 |||||| || | | || ||||| |||||| | ||||||||||| |||| ||| Sbjct 576917 GGAGACCTACAGCAAAATCACACGTTTCTGCCTGATCTGCAACTACGTCACTCGA--ATC 576974 Query 254340 ATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||| ||||| ||| ||| ||| |||||| || |||| Sbjct 576975 ATCGATCCGCTTGCTAGTCGCTGCAGCAAGTTCCGTTTCA 577014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073746671555712