Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq549 132 4e-26 seq1102 116 3e-21 >seq549 Length=514063 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| |||||||||||| || ||| |||| || Sbjct 328348 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 328407 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| |||||||| || | |||||||||||| Sbjct 328408 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 328467 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||||||||| | ||| || |||||| Sbjct 328468 ATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTG 328527 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 ||||| || ||||| || || || ||||| |||||| Sbjct 328528 CCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 328563 >seq1102 Length=1535874 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| ||||| |||||| |||| ||| | || |||| || Sbjct 933195 GTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTG 933254 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || ||||| ||||| ||||| || || | ||||||||||||| ||| || Sbjct 933255 CTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTT 933314 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| ||||| | || || || ||||| || Sbjct 933315 GCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGT 933374 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| |||||||| ||||| Sbjct 933375 CAGGGTCTTGACAAAGATCTGCAT 933398 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||||||||||||||| ||| | || |||| || Sbjct 933418 ACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCG 933477 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || || | ||||| ||||| ||||| | || ||||| ||| | Sbjct 933478 AGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGA 933537 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | |||| ||| ||||||| ||| || |||||| Sbjct 933538 ATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTG 933597 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || ||||| ||||| Sbjct 933598 CCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||| ||||||||| |||||||||||| || ||| |||| || || || Sbjct 933651 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTG 933710 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| ||||| | |||||||||||| || || Sbjct 933711 CTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 933770 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | || | ||| ||||| | ||| || || ||||| || Sbjct 933771 CGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTTTTGCCGGT 933830 Query 45313 CAGAGTCTTCACAA 45326 || ||||| |||| Sbjct 933831 CAAGGTCTTGACAA 933844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395068295320114