Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq224 136 8e-27 seq769 134 3e-26 >seq224 Length=800728 Score = 136 bits (150), Expect = 8e-27 Identities = 295/439 (67%), Gaps = 7/439 (2%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| ||||| || |||||||| ||||| || || || ||||| |||||| Sbjct 538154 GTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCCATCTTCTGG 538095 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| ||||| |||| |||||| ||| |||| ||| | ||| Sbjct 538094 CTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAC 538035 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTG--ATACCC 102095 |||||||| || || || || ||| |||| || | || | ||| Sbjct 538034 GAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTTCTCCCA----CCTGAAGCACCGCCC 537979 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 || |||| || | || || || |||| || |||||| || || || ||||| Sbjct 537978 CAGCAAG-GAGCGCATCAGGGAGATCATCACCGATGCCGTCACTATCGAGCAGGAATTCT 537920 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACA 102215 | || | |||| || | |||| ||||||| || |||||| ||||||| Sbjct 537919 TGACCGAGGCCCTTCCCTGCGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACA 537860 Query 102216 TTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTA 102275 | || || || || ||| || | | | |||| || ||| ||| || || Sbjct 537859 TCGAGTTCGTCGCTGATCGTCTGCTCATCGCCTTGGGCAATGACAAGGTCTACAAGGTCT 537800 Query 102276 CCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAA 102335 ||||||||||| |||||||| || || ||||||| ||||||||||| || || | Sbjct 537799 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 537740 Query 102336 AGAGAGTCGCCGAGTATCA 102354 || | || ||||| || || Sbjct 537739 AGCGCGTTGCCGATTACCA 537721 >seq769 Length=2557781 Score = 134 bits (148), Expect = 3e-26 Identities = 184/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || || |||||||||| || || ||| || || || |||||||| Sbjct 972208 CCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAAATACCG 972267 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 |||||||| ||||| | | | | | |||||||| ||||| || |||| | || Sbjct 972268 TCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCTGGGACTGGGGAGTG 972327 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 || |||||| || |||||||||||||| || || | | ||||||||||| | || Sbjct 972328 CCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTCGACATGAGGTTGTAG 972387 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || ||||||||| | ||||| ||| ||||||||||| ||||||||||||||| Sbjct 972388 GTCTCAATGACACGCTCGATGTTGTCTCCCCAGATGCCGACAGCAACACGCATAATCATG 972447 Query 95026 TCCTGAGGGCGCTCAAC 95042 | ||| || ||||| || Sbjct 972448 TGCTGGGGACGCTCGAC 972464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989565818249470