Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq769 161 1e-34
seq224 91.5 2e-13
>seq769
Length=2557781
Score = 161 bits (178), Expect = 1e-34
Identities = 562/861 (65%), Gaps = 26/861 (3%)
Strand=Plus/Plus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293
|| |||||||| | ||| || || | | || || || ||||| || || || ||||||
Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955
Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353
|||||||| | || | || | | | |||||| || || ||||| |||
Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGA 972015
Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413
|| || || | | | ||||| |||||||| || | ||| ||||| | | |||||
Sbjct 972016 TCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGG 972075
Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473
|| ||||| || ||||| || | ||||||||| ||||| || | || | | ||| ||
Sbjct 972076 CGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGG 972135
Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533
| | |||||| ||| | || ||||| |||| || || ||| | ||||||||
Sbjct 972136 ACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGG 972195
Query 63534 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63591
| |||| |||| || || || ||||| || ||||| | || || || | |
Sbjct 972196 TGGACGTTGA--GACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 972253
Query 63592 TGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63651
|||| || || || || ||||| ||||| |||||| | || || ||| |||| |
Sbjct 972254 TGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCT 972313
Query 63652 GGTGAC-GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710
|| ||| | | ||| ||||||||||| | ||| || ||||| ||||| || | ||
Sbjct 972314 GG-GACTGGGGAGTGCCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTC 972372
Query 63711 GAAAGTAGATTGTACGTCTCAAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTA 63765
|| | || ||||| |||||||| ||| || | | |||| |||| || |
Sbjct 972373 GACATGAGGTTGTAGGTCTCAATGACACGCTCGATGTTGTCTCCC-CAGATG----CCGA 972427
Query 63766 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACA 63825
| || |||||||| | ||||||||| || | || || || ||| || | || | |
Sbjct 972428 CAGCAACACGCATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAA 972487
Query 63826 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 63883
||| || || | || || || ||||| || | ||| ||||| || || |||||
Sbjct 972488 GGTATGAGCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAA--TCGCGATCGTA 972545
Query 63884 AATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGA 63943
| ||| |||| | | | ||||| | | | || | ||| | | |||||
Sbjct 972546 GACAATGGCCGAGTCCAATTCTTCCTTGTGCCTCATGAC-GCACTCAT-ATGTTTCTTGA 972603
Query 63944 --AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATC 64001
|| || || ||| ||| | |||||||| || ||||||| | | || || ||
Sbjct 972604 GCGATCATGGGCGAAGCTTTGCTGTTTTTAGGGTTGACATAGTGGTACAAGTCGCTGATG 972663
Query 64002 ACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGC 64060
|| || | || | ||||| || | |||||| || ||||| | ||| || | |||||
Sbjct 972664 AC-AGACGACCATTGCTTTTTGGTCTGCTTGTGGAGGTTTGACACGGCAATGCGAGCGGC 972722
Query 64061 TAGAATGGCATAATCCGGATG 64081
||| |||||||| || || ||
Sbjct 972723 TAGGATGGCATAGTCGGGGTG 972743
>seq224
Length=800728
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| |||||||| ||| ||||| ||||| | | || | ||||| || || || ||
Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| || |||||||| || ||||| || ||||| || || | || ||||||
Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 33758
|| || || || ||||| ||||||| || | || || | || | |||| ||
Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
|||||| |||||| |||||||||||
Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629806310519520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |