Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq769 188 9e-43
seq224 96.9 5e-15
>seq769
Length=2557781
Score = 188 bits (208), Expect = 9e-43
Identities = 568/861 (66%), Gaps = 26/861 (3%)
Strand=Plus/Plus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| |||||||| | ||| || || | | || || || ||||| || || || ||||||
Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|||||||| | || || || | || | |||||| || || ||||| |||
Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGA 972015
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
|| || || | | | |||| |||||||| || | ||| ||||| | | |||||
Sbjct 972016 TCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGG 972075
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| ||||| || ||||| || | ||||||||| ||||| || | || | | ||| ||
Sbjct 972076 CGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGG 972135
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--AT 66324
| | ||| |||||||| || ||||| |||| || || ||| | ||||||||
Sbjct 972136 ACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGG 972195
Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| ||| ||||| || || || ||||| || ||||| | || || || | |
Sbjct 972196 TGGACGTTG--AGACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 972253
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
| || || || || || || || |||||| |||||| | || || ||| |||| |
Sbjct 972254 TGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCT 972313
Query 66445 GGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503
|| ||| | ||| ||||||||||| | ||| || ||||| ||||| || | ||
Sbjct 972314 GG-GACTGGGGAGTGCCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTC 972372
Query 66504 GAAAGTAGATTGTACGTCTCAAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTA 66558
|| | || ||||| |||||||| ||| || | | |||| |||| || |
Sbjct 972373 GACATGAGGTTGTAGGTCTCAATGACACGCTCGATGTTGTCTCCC-CAGATG----CCGA 972427
Query 66559 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 66618
| || |||||||| | ||||||||| || | || ||||||||| || | || | |
Sbjct 972428 CAGCAACACGCATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAA 972487
Query 66619 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 66676
||| || || | || || || ||||| || | ||| ||||| || || |||||
Sbjct 972488 GGTATGAGCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAA--TCGCGATCGTA 972545
Query 66677 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGA 66736
| ||| |||||| | || ||||| | | | || || ||| | | |||||
Sbjct 972546 GACAATGGCCGAGTCCAATTCTTCCTTGTGCCTCATGAC-GCACTCAT-ATGTTTCTTGA 972603
Query 66737 --AATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATC 66794
|| || || ||| ||| | |||||||| |||||||||| | | || || ||
Sbjct 972604 GCGATCATGGGCGAAGCTTTGCTGTTTTTAGGGTTGACATAGTGGTACAAGTCGCTGATG 972663
Query 66795 ACTTCACTA-AATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGC 66853
|| || | || | ||||| || | ||||| || ||||| ||||| || | ||||||
Sbjct 972664 AC-AGACGACCATTGCTTTTTGGTCTGCTTGTGGAGGTTTGACACGGCAATGCGAGCGGC 972722
Query 66854 TATAATGGCATAATCCGGATG 66874
|| |||||||| || || ||
Sbjct 972723 TAGGATGGCATAGTCGGGGTG 972743
>seq224
Length=800728
Score = 96.9 bits (106), Expect = 5e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| |||||||| ||| ||||| ||||| | | || | |||||||| || || ||
Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|||||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||
Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334
|| || || || || || ||||||| || | || || | || | |||| ||
Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363
|||||| |||||| |||||||||||
Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658161002252560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |