Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq224 98.7 7e-16 >seq224 Length=800728 Score = 98.7 bits (108), Expect = 7e-16 Identities = 277/423 (65%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 |||||| | ||||| || || ||||| || || | || ||| | ||||| |||| Sbjct 538160 CGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCCATC 538101 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| ||||| ||| || ||||| || || | || ||||||||| | || Sbjct 538100 TTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCT 538041 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 |||||||||||||| ||| ||| || || || |||| || || || || | | Sbjct 538040 CGTGACGAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTTCTCCCACCTG--AAGC--A 537985 Query 22921 CCGTGTCAGGACGATGCACATC----AAATCATATCTGATGCCGTTGACATTGAGACGGC 22976 ||| ||| | | || |||| | ||||| | |||||||| || ||| || Sbjct 537984 CCGCCCCAGCAAGGAGCGCATCAGGGAGATCATCACCGATGCCGTCACTATCGAGCAGGA 537925 Query 22977 TTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACT 23036 ||||| ||||| || |||| || || ||||| | |||| | Sbjct 537924 ATTCTTGACCGAGGCCCTTCCCTGCGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCA 537865 Query 23037 GTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAA 23096 |||||| |||| || || ||||| |||||| ||| |||| ||| ||| | || || Sbjct 537864 GTACATCGAGTTCGTCGCTGATCGTCTGCTCATCGCCTTGGGCAATGACAAGGTCTACAA 537805 Query 23097 CGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTT 23156 || |||| || || || |||||||| ||||| | | | || || || |||||||| Sbjct 537804 GGTCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTT 537745 Query 23157 TGA 23159 || Sbjct 537744 CGA 537742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356227374149902