Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1102 118 1e-21 seq549 98.7 1e-15 >seq1102 Length=1535874 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || || || |||||||| || ||||||| ||| | |||||||||||| || ||| Sbjct 933430 GTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCA 933489 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| |||| || || ||||| || ||||| |||||||| || || ||| | || | ||| Sbjct 933490 GCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTCGATTT 933548 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | ||||| | | ||| ||||| | ||| | ||||||||||| | ||| Sbjct 933549 GACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTGCCGGTGAGCGT 933608 Query 139747 TTTTACGAATATTTGCATA 139765 ||| ||||| || |||||| Sbjct 933609 TTTGACGAAGATCTGCATA 933627 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | ||| | || ||||| || || ||||| || ||| Sbjct 933628 CCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 933687 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||| ||||| || || || |||||||||| ||||| || ||||| Sbjct 933688 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 933747 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | || |||| | ||| ||| Sbjct 933748 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACC 933807 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATT 139759 |||| ||| | || ||||||||||| || || || | |||| Sbjct 933808 TCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAACTATT 933849 >seq549 Length=514063 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||||| || | ||| | || ||||| || || ||||| || ||| Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||||||||| ||||| ||||| || Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | ||||| | | ||||||| Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 328509 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||||| || | || || ||||| || ||||| Sbjct 328510 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 328556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496055108052800