Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 118 1e-21
seq549 98.7 1e-15
>seq1102
Length=1535874
Score = 118 bits (130), Expect = 1e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || |||||||| || ||||||| ||| | |||||||||||| || |||
Sbjct 933430 GTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCA 933489
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
||| |||| || || ||||| || ||||| |||||||| || || ||| | || | |||
Sbjct 933490 GCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTCGATTT 933548
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| | | ||| ||||| | ||| | ||||||||||| | |||
Sbjct 933549 GACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTGCCGGTGAGCGT 933608
Query 139747 TTTTACGAATATTTGCATA 139765
||| ||||| || ||||||
Sbjct 933609 TTTGACGAAGATCTGCATA 933627
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| | ||| | || ||||| || || ||||| || |||
Sbjct 933628 CCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 933687
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| |||||| ||||| || || || |||||||||| ||||| || |||||
Sbjct 933688 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 933747
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | || |||| | ||| |||
Sbjct 933748 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACC 933807
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATT 139759
|||| ||| | || ||||||||||| || || || | ||||
Sbjct 933808 TCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAACTATT 933849
>seq549
Length=514063
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | ||||| || | ||| | || ||||| || || ||||| || |||
Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| |||||||| || || || |||||||||| ||||| ||||| ||
Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||| | | |||||||
Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 328509
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| ||| | |||||||| || | || || ||||| || |||||
Sbjct 328510 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 328556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496055108052800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |