Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq769 183 4e-41
seq224 91.5 2e-13
>seq769
Length=2557781
Score = 183 bits (202), Expect = 4e-41
Identities = 746/1151 (65%), Gaps = 36/1151 (3%)
Strand=Plus/Plus
Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763
||||||| ||| ||||| || ||||||| | | ||| | |||||||| ||||||
Sbjct 971611 GATGCCAAATTGCAAACAGCCACCTCATCGGGCGCACAATACTCGATAATTTCCGTGCAA 971670
Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823
|| || | ||| ||||| | || | || || ||||| ||| || ||||
Sbjct 971671 AGGTTGGAGCTTCGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCC 971730
Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883
|| || || || || || | || || ||| |||| | || | || | | ||||| |
Sbjct 971731 TTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGGGCCTCCAGGATGGAGTACCAGA-G 971789
Query 71884 ACTC-GAGCCTTTATTATATTCTTGT-ATCTCTTTTCTCTT--TCGTATTGTGTATATAA 71939
|| ||||||| ||| | |||| | | | ||| | ||||| | || ||
Sbjct 971790 CTTCTGAGCCTTGATTGT---CTTGCGACCACGACCCTCCTGCTCGTACTTCTCGTACAA 971846
Query 71940 TCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCATTCGGACACATCA 71998
||||||||| || || | ||| | | | || || || || || || |||||||
Sbjct 971847 GGCTTCGAACTCCTCGCCGTA-GCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATCA 971905
Query 71999 ATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 72058
| | ||| || |||| | | || || ||||| || || || |||||||||||||| |
Sbjct 971906 AAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATCCAAAGAGCCA 971965
Query 72059 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 72118
|| | || | || | ||||| || || ||||| ||||| || ||
Sbjct 971966 AGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGATCAAGAAAGT 972025
Query 72119 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTC 72178
| | | ||||| |||||||| || | ||| ||||| | | || || || ||||| |
Sbjct 972026 CGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGGCGCTTGTTGC 972085
Query 72179 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 72238
| ||||| || | ||||||||| ||||| || | || | | ||| || | | ||| |
Sbjct 972086 CACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGGACCAGACCGT 972145
Query 72239 TGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAA--TTGA 72296
|||||| || ||||| |||| || || ||| | |||||||| | | ||||
Sbjct 972146 TGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGGTGGACGTTGA 972205
Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356
|||| || || || ||||| || ||||| | || || || | || || || ||
Sbjct 972206 --GACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAAAT 972263
Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-GAC 72415
|| || || || |||||| |||||| | || || ||| |||| ||| ||| |
Sbjct 972264 ACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCTGG-GACTGGG 972322
Query 72416 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 72475
||| ||||||||||| | ||| || ||||| ||||| || | || |||| || |
Sbjct 972323 GAGTGCCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTCGACATGAGGT 972382
Query 72476 TGTACGTCTCAAT----AGCT-GATTCTATATCCCATTGATGTATTCCTACCGCGACACG 72530
|||| |||||||| ||| ||| | | |||| |||| || || || |||||
Sbjct 972383 TGTAGGTCTCAATGACACGCTCGATGTTGTCTCCC-CAGATG----CCGACAGCAACACG 972437
Query 72531 CATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTT 72590
||| | ||| ||||| || | || ||||||||| | | || | | ||| ||
Sbjct 972438 CATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAAGGTATGAGCG 972497
Query 72591 TTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACC 72648
|| | || || || ||||| || | ||| ||||| || || ||||| | ||| ||
Sbjct 972498 CTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAA--TCGCGATCGTAGACAATGGCC 972555
Query 72649 GAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGA--AATAATCG 72706
|| | | || ||||| | | | || | ||| || | ||||| || || |
Sbjct 972556 GAGTCCAATTCTTCCTTGTGCCTCATGAC-GCACTCAT-ATGTTTCTTGAGCGATCATGG 972613
Query 72707 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA- 72765
| ||| ||| | |||||||| || ||||||| | | || || || || || |
Sbjct 972614 GCGAAGCTTTGCTGTTTTTAGGGTTGACATAGTGGTACAAGTCGCTGATGAC-AGACGAC 972672
Query 72766 AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCA 72825
|| | ||||| || | |||||| || ||||| ||||| || | |||||||| ||||||
Sbjct 972673 CATTGCTTTTTGGTCTGCTTGTGGAGGTTTGACACGGCAATGCGAGCGGCTAGGATGGCA 972732
Query 72826 TAATCTGGATG 72836
|| || || ||
Sbjct 972733 TAGTCGGGGTG 972743
>seq224
Length=800728
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| |||||||| ||| ||||| || || | | || | |||||||| || || ||
Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| || |||||||| || ||||| || || || ||||| | ||| ||||||
Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241
|| || || || || || ||||||| || | || || | || | |||| ||
Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
|||||| |||||| |||||||||||
Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671127169829840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |