Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq769 179 5e-40
seq224 147 3e-30
>seq769
Length=2557781
Score = 179 bits (198), Expect = 5e-40
Identities = 340/495 (69%), Gaps = 4/495 (1%)
Strand=Plus/Minus
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
||||||| ||||| ||||| || || || ||||| | ||| ||||| | || || |
Sbjct 972103 GATACGTGGACCAGGGTGGCAACAAGCGCCCTGGCGCCTTCGCCATCTACCTCGAGCCGT 972044
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||||| || || || |||||| | || ||||||| ||| ||| || || | |
Sbjct 972043 GGCACGCTGATGTCTTCGACTTTCTTGATCTGCGCAAGAACCACGGCAAGGAGGAAGTCC 971984
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044
| ||| | |||||||| | || || ||| | || || ||||||||||||| || |
Sbjct 971983 GTGCCCGTGACTTGTTCTTGGCTCTTTGGATTCCCGACCTGTTCATGAAGCGTGTTGAGA 971924
Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104
| |||| | |||| | ||||||||| || || ||||| || | || |||| |
Sbjct 971923 AGAATGGCGAATGGACTTTGATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACG 971864
Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163
|||| ||||| || ||| |||| | |||||||| ||||| || || |||| |
Sbjct 971863 GCGAGGAGTTCGAAGCCTTGTACGAGAAGTACGAGCAGGAGGGTCGTGGTCGCAAGAC-A 971805
Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222
|| | || | |||| || ||| | ||||| || ||| ||| ||||| || | ||
Sbjct 971804 ATCAAGGCTC-AGAAGCTCTGGTACTCCATCCTGGAGGCCCAGACTGAGACCGGCAACCC 971746
Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282
| ||| |||||||||||| | || ||||| |||||||| || |||| || ||
Sbjct 971745 CTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACTAT 971686
Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342
| ||||||| || |||||||||||| | ||||| | || || ||| ||| ||
Sbjct 971685 CCGAAGCTCCAACCTTTGCACGGAAATTATCGAGTATTGTGCGCCCGATGAGGTGGCTGT 971626
Query 97343 TTGCGTTCTGGCATC 97357
|||| | |||||||
Sbjct 971625 TTGCAATTTGGCATC 971611
>seq224
Length=800728
Score = 147 bits (162), Expect = 3e-30
Identities = 206/284 (73%), Gaps = 10/284 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| ||||| ||||| | |||||| | |||||
Sbjct 538623 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAAGAAATTGATCTC 538564
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTAT 125134
||||||||| || |||||||| | | || | || || ||| ||||| || |
Sbjct 538563 TCCAAGGACATGCACGATTGGAACAACCGCCTCACCGA---TGA-CGAGAAGTACTTCGT 538508
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193
|||||||| |||||||||| |||| ||| ||||| ||||||||||| ||||| || ||
Sbjct 538507 GTCGCACATCCTGGCCTTCTTCGCCGCCTCAGATGGTATCGTCAACGAGAATCTCGTCGA 538448
Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253
|||||| ||| | ||||| |||| ||||| ||||| ||||| ||||
Sbjct 538447 -GCGATTCAGCGGCGAGGTTCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCA 538389
Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297
|||| |||||| | ||||| || | ||||| |||||||||
Sbjct 538388 TGATGGAGAACATTCACTCCGAGACATACTCACTCCTGATTGAC 538345
Score = 143 bits (158), Expect = 4e-29
Identities = 334/501 (67%), Gaps = 21/501 (4%)
Strand=Plus/Minus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| ||||| ||||| | |||| || ||||||||| | ||| | | || || | ||
Sbjct 538223 ATTCGTAAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTCCTCCTTTGCT 538164
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | || || || ||||| ||||| ||||| |||||||| || ||||| ||
Sbjct 538163 CAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCC 538104
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| |||||||||||||| || || |||||||| ||||| | |||||| | ||
Sbjct 538103 ATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATC 538044
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600
||||| ||||| || || ||| ||| || ||| || || || | | | |||
Sbjct 538043 TCTCGTGACGAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTT---CTCCCACCTG--- 537990
Query 125601 CCCGAGTGCAGATCCAGCGATGAAAAGGTCATCA---ACATTGTAACCGATGCCGTGAGG 125657
|| | | ||||| | | || ||||| | || | ||||||||||| |
Sbjct 537989 ---AAGCACCGCCCCAGCAAGG---AGCGCATCAGGGAGATCATCACCGATGCCGTCACT 537936
Query 125658 ATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG 125717
|| || || || || | ||||| |||| || | | || | |||||||||| ||
Sbjct 537935 ATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCGCCCTGCTGGGCATGAACTCCACC 537876
Query 125718 CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--- 125774
|| ||| ||||||| ||||| || || |||||||| || || ||| |||
Sbjct 537875 CTGATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCATCGCCTTG---GGCAAT 537819
Query 125775 CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834
|||| | ||||| | | || ||||| || |||||| | ||| || || | ||
Sbjct 537818 GACAAGGTCTACAAGGTCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGC 537759
Query 125835 AAGACCAACTTTTTCGAGAAG 125855
||||||||||| |||||||||
Sbjct 537758 AAGACCAACTTCTTCGAGAAG 537738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741045916513840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |