Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq769 179 5e-40 seq224 147 3e-30 >seq769 Length=2557781 Score = 179 bits (198), Expect = 5e-40 Identities = 340/495 (69%), Gaps = 4/495 (1%) Strand=Plus/Minus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||| ||||| || || || ||||| | ||| ||||| | || || | Sbjct 972103 GATACGTGGACCAGGGTGGCAACAAGCGCCCTGGCGCCTTCGCCATCTACCTCGAGCCGT 972044 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| || || || |||||| | || ||||||| ||| ||| || || | | Sbjct 972043 GGCACGCTGATGTCTTCGACTTTCTTGATCTGCGCAAGAACCACGGCAAGGAGGAAGTCC 971984 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | |||||||| | || || ||| | || || ||||||||||||| || | Sbjct 971983 GTGCCCGTGACTTGTTCTTGGCTCTTTGGATTCCCGACCTGTTCATGAAGCGTGTTGAGA 971924 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | |||| | |||| | ||||||||| || || ||||| || | || |||| | Sbjct 971923 AGAATGGCGAATGGACTTTGATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACG 971864 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 |||| ||||| || ||| |||| | |||||||| ||||| || || |||| | Sbjct 971863 GCGAGGAGTTCGAAGCCTTGTACGAGAAGTACGAGCAGGAGGGTCGTGGTCGCAAGAC-A 971805 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || | || | |||| || ||| | ||||| || ||| ||| ||||| || | || Sbjct 971804 ATCAAGGCTC-AGAAGCTCTGGTACTCCATCCTGGAGGCCCAGACTGAGACCGGCAACCC 971746 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| |||||||||||| | || ||||| |||||||| || |||| || || Sbjct 971745 CTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACTAT 971686 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 | ||||||| || |||||||||||| | ||||| | || || ||| ||| || Sbjct 971685 CCGAAGCTCCAACCTTTGCACGGAAATTATCGAGTATTGTGCGCCCGATGAGGTGGCTGT 971626 Query 97343 TTGCGTTCTGGCATC 97357 |||| | ||||||| Sbjct 971625 TTGCAATTTGGCATC 971611 >seq224 Length=800728 Score = 147 bits (162), Expect = 3e-30 Identities = 206/284 (73%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| ||||| ||||| | |||||| | ||||| Sbjct 538623 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAAGAAATTGATCTC 538564 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTAT 125134 ||||||||| || |||||||| | | || | || || ||| ||||| || | Sbjct 538563 TCCAAGGACATGCACGATTGGAACAACCGCCTCACCGA---TGA-CGAGAAGTACTTCGT 538508 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 |||||||| |||||||||| |||| ||| ||||| ||||||||||| ||||| || || Sbjct 538507 GTCGCACATCCTGGCCTTCTTCGCCGCCTCAGATGGTATCGTCAACGAGAATCTCGTCGA 538448 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 |||||| ||| | ||||| |||| ||||| ||||| ||||| |||| Sbjct 538447 -GCGATTCAGCGGCGAGGTTCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCA 538389 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297 |||| |||||| | ||||| || | ||||| ||||||||| Sbjct 538388 TGATGGAGAACATTCACTCCGAGACATACTCACTCCTGATTGAC 538345 Score = 143 bits (158), Expect = 4e-29 Identities = 334/501 (67%), Gaps = 21/501 (4%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || ||||| ||||| | |||| || ||||||||| | ||| | | || || | || Sbjct 538223 ATTCGTAAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTCCTCCTTTGCT 538164 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || ||||| ||||| ||||| |||||||| || ||||| || Sbjct 538163 CAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCC 538104 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || || |||||||| ||||| | |||||| | || Sbjct 538103 ATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACGAGCTCATC 538044 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600 ||||| ||||| || || ||| ||| || ||| || || || | | | ||| Sbjct 538043 TCTCGTGACGAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTT---CTCCCACCTG--- 537990 Query 125601 CCCGAGTGCAGATCCAGCGATGAAAAGGTCATCA---ACATTGTAACCGATGCCGTGAGG 125657 || | | ||||| | | || ||||| | || | ||||||||||| | Sbjct 537989 ---AAGCACCGCCCCAGCAAGG---AGCGCATCAGGGAGATCATCACCGATGCCGTCACT 537936 Query 125658 ATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG 125717 || || || || || | ||||| |||| || | | || | |||||||||| || Sbjct 537935 ATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCGCCCTGCTGGGCATGAACTCCACC 537876 Query 125718 CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--- 125774 || ||| ||||||| ||||| || || |||||||| || || ||| ||| Sbjct 537875 CTGATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCATCGCCTTG---GGCAAT 537819 Query 125775 CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834 |||| | ||||| | | || ||||| || |||||| | ||| || || | || Sbjct 537818 GACAAGGTCTACAAGGTCTCCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGC 537759 Query 125835 AAGACCAACTTTTTCGAGAAG 125855 ||||||||||| ||||||||| Sbjct 537758 AAGACCAACTTCTTCGAGAAG 537738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741045916513840