Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq549 91.5 1e-13 seq1102 84.2 2e-11 >seq549 Length=514063 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || |||||||| || | | || ||||||| |||||| Sbjct 328354 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 328413 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | ||||||||| || ||| | | ||||||||| || || Sbjct 328414 TTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTG 328473 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| || | ||||||| ||| | || ||||| || || ||| Sbjct 328474 GACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTG 328533 Query 48704 AGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 || || || || |||||||||||| || || Sbjct 328534 AGGGTCTTGACGAAAATCTGCATCTTGCCT 328563 >seq1102 Length=1535874 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || ||||| || || || | || ||| | ||||||| ||| Sbjct 933196 TGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTG-CGCCCATCCTCCAACTG 933254 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | | || || |||||||| || || | || ||||||||| ||| || Sbjct 933255 CTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTT 933314 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || ||||| ||| | ||||| ||| | || |||||||| || Sbjct 933315 GCTCTTGACGTTGTCG--ATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCA 933372 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || || ||||| |||||||| Sbjct 933373 GTCAGGGTCTTGACAAAGATCTGCAT 933398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421243837845434