Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 118 1e-21
>seq1102
Length=1535874
Score = 118 bits (130), Expect = 1e-21
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876
||||| || | |||||| ||||||| |||| |||||||| ||| || || |||||
Sbjct 933208 TCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTGCCCGCAAAG 933267
Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936
|| || | ||||| || || |||||||| || ||||| | ||| || ||||||| |
Sbjct 933268 ATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG 933327
Query 94937 CCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995
||| ||||| || | || || |||| ||||||||||| ||||| || || || ||
Sbjct 933328 TCGATGGTGTC-GCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGAC 933386
Query 94996 AAAGATCTGCAT 95007
||||||||||||
Sbjct 933387 AAAGATCTGCAT 933398
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||| ||||| || |||||||| || | ||| || ||||||| || | || ||
Sbjct 933417 CACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTC 933476
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| ||||| ||||||| | | ||||| || |||||||| ||||| || || |
Sbjct 933477 GAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTG 933536
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||||| | ||| ||||| | ||||| || | ||||| || ||
Sbjct 933537 AATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTT 933596
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || |||||||||||
Sbjct 933597 GCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448283164380240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |