Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq769 192 7e-44 seq224 105 8e-18 >seq769 Length=2557781 Score = 192 bits (212), Expect = 7e-44 Identities = 569/861 (66%), Gaps = 26/861 (3%) Strand=Plus/Plus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || |||||||| | ||| || || | | || || || ||||| || || || |||||| Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 |||||||| | || | || | || | |||||| || || ||||| ||| Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGA 972015 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 || || || | | | ||||| |||||||| || | ||| ||||| | | ||||| Sbjct 972016 TCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGG 972075 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || ||||| || ||||| || | ||||||||| ||||| || | || | | ||| || Sbjct 972076 CGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGG 972135 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--AT 63480 | | |||||| ||| | || ||||| |||| || || ||| | |||||||| Sbjct 972136 ACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGG 972195 Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540 | ||| ||||| || || || ||||| || ||||| | || || || | | Sbjct 972196 TGGACGTTG--AGACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 972253 Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600 |||| || ||||| || ||||| ||||| |||||| | || || ||| |||| | Sbjct 972254 TGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCT 972313 Query 63601 GGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659 || ||| | ||| ||||||||||| | ||| || ||||| ||||| || | || Sbjct 972314 GG-GACTGGGGAGTGCCCGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTC 972372 Query 63660 GAAAGTAGATTGTACGTCTCAAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTA 63714 || | || ||||| |||||||| ||| || | | |||| |||| || | Sbjct 972373 GACATGAGGTTGTAGGTCTCAATGACACGCTCGATGTTGTCTCCC-CAGATG----CCGA 972427 Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774 | || |||||||| | ||||||||| || | || ||||||||| || | || | | Sbjct 972428 CAGCAACACGCATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAA 972487 Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 63832 ||| || || | || || || ||||| || | ||| ||||| || || ||||| Sbjct 972488 GGTATGAGCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAA--TCGCGATCGTA 972545 Query 63833 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGA 63892 | ||| |||||| | || ||||| | | | || | ||| || | ||||| Sbjct 972546 GACAATGGCCGAGTCCAATTCTTCCTTGTGCCTCATGAC-GCACTCAT-ATGTTTCTTGA 972603 Query 63893 --AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATC 63950 || || || ||| ||| | |||||||| || ||||||| | | || || || Sbjct 972604 GCGATCATGGGCGAAGCTTTGCTGTTTTTAGGGTTGACATAGTGGTACAAGTCGCTGATG 972663 Query 63951 ACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 64009 || || | || | ||||| || | |||||| || ||||| ||||| || | ||||| Sbjct 972664 AC-AGACGACCATTGCTTTTTGGTCTGCTTGTGGAGGTTTGACACGGCAATGCGAGCGGC 972722 Query 64010 TAGAATGGCATAATCCGGATG 64030 ||| |||||||| || || || Sbjct 972723 TAGGATGGCATAGTCGGGGTG 972743 >seq224 Length=800728 Score = 105 bits (116), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || |||||||| ||| ||||| ||||| | | || || |||||||| || || || Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || ||||| || || | ||| |||||| Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 33480 || || || || ||||| ||||||| || | || || | || | |||| || Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 |||||| |||||| ||||||||||| Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622936033671440