Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq549 102 7e-17
seq1102 95.1 1e-14
>seq549
Length=514063
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | ||| |||| ||||| ||||||||||| || |||||||||||||
Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || ||||| || | || || ||||| ||||| ||
Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| || | ||| || | | | | ||||| | ||||
Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 328509
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| | ||||||||| || || || || || ||||| ||||||||||| |||
Sbjct 328510 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 328560
>seq1102
Length=1535874
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||| ||||| || |||||||||||| || ||| | ||||
Sbjct 933415 AGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCT 933474
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | ||||| ||||| ||||| ||| | ||| || || ||
Sbjct 933475 TCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 933534
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | | || || | | | | ||||| | ||| |||| |||||| ||
Sbjct 933535 TGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTC 933594
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| ||||| ||||||||||| || ||||||||
Sbjct 933595 TTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||| |||||| || ||||| |||||| || || | |||||||| ||
Sbjct 933196 TGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTGC 933255
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851
||||||||| | || | ||||| ||||| || | ||||| ||||| ||| |||
Sbjct 933256 TTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTTG 933315
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
|| ||| || | | | | ||||||| | ||| || | ||||||||||| || ||
Sbjct 933316 CT-CTTGACGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGT 933374
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
||| || |||||||| ||||||||
Sbjct 933375 CAGGGTCTTGACAAAGATCTGCAT 933398
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| ||||||||||| || ||||||||||||| | ||| | |||| || | ||
Sbjct 933652 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTGC 933711
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||| ||||| ||| | |||||| ||||| || | |
Sbjct 933712 TTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 933771
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | || ||| | ||| || | |||||||||||| ||||||
Sbjct 933772 GACTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTTTTGCCGGTC 933831
Query 16913 AGCGTTTTGACAA 16925
| || |||||||
Sbjct 933832 AAGGTCTTGACAA 933844
Score = 82.4 bits (90), Expect = 6e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || || | ||| || ||||||||||| || ||||||||||||| |
Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | ||| ||||| || | || || ||||| ||||| |||
Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| || || || | | |||||| | | | | || ||| | |||
Sbjct 934029 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTCTCGACC 934088
Query 16889 TCCACGGTGATGGTTTTTCCGGTCA 16913
|| | ||||||||| || || ||||
Sbjct 934089 TCAAGGGTGATGGTCTTGCCCGTCA 934113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405080920327660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |