Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq658 140 2e-28
seq224 109 4e-19
>seq658
Length=2797339
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 882503 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 882444
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 882443 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 882409
>seq224
Length=800728
Score = 109 bits (120), Expect = 4e-19
Identities = 200/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
|||| ||||| |||||||| ||| ||| || | ||| |||| || ||||| |||
Sbjct 484086 GACGACTTCTATCGCTACAAGATGGAGCGTCTCCAGACAAAGATCGAAGGCAAGGGCAAC 484145
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
||||| |||||||| | |||||| | | || ||| | |||| || |||| |
Sbjct 484146 GGTATCAAAACCGTGGTCGTCAACCTCACCAGCGTTGCTGCCTCTCTCGCTCGACCTGGC 484205
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | || | |||||| | ||||||||| || || || | | |||| |||
Sbjct 484206 GCCTATGTCATAAAGTTTTTCGGCTTCGAACTTGGAGCCCAAACCAACATGGATCCCAAG 484265
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| | ||||| | ||| | | |||||||||||||| |||||
Sbjct 484266 GACGACCGTTGGATCATCAACGGTGCCCATGATGCCGCCAAGCTGCAGGATCACCTTGAT 484325
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| || || |||||||||||| || | | ||| | ||||| || |||||
Sbjct 484326 GGTTTCATCAACAAGTTTGTGCTCTGCAAGAAGTGCAAGAACCCCGAAACCGA 484378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334941346169654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |