Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq769 179 5e-40
seq224 96.9 4e-15
>seq769
Length=2557781
Score = 179 bits (198), Expect = 5e-40
Identities = 577/879 (66%), Gaps = 26/879 (3%)
Strand=Plus/Plus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || || | || |||||||| | ||| || || | | || || || |||
Sbjct 971878 AGGCCGGGGCACTCGTTGGGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTC 971937
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| || || || |||||||||||||| | || | || | || | |||||| ||
Sbjct 971938 ATGAACAGGTCGGGAATCCAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCCTCCTTG 971997
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| ||||| || || | | | ||||| |||||||| || | |||
Sbjct 971998 CCGTGGTTCTTGCGCAGATCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAG 972057
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | ||||| || ||||| || ||||| || | ||||||||| ||||| ||
Sbjct 972058 ATGGCGAAGGCGCCAGGGCGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTG 972117
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | | ||| || | | ||| |||||||| || ||||| || | || ||
Sbjct 972118 AAGACACGAAGCATGGGGACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAG 972177
Query 63320 CCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
||| | |||||||| | ||| ||||| || || || ||||| || ||||| |
Sbjct 972178 CCAGTAGCACGAATGCGGTGGACGTTG--AGACCGATACCGCCGGCCATCTTGGAGATCA 972235
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | || || || || || || || || |||||| |||||| | |
Sbjct 972236 TGGCACAAGTCTTGAGGGTGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCA 972295
Query 63438 GAAAACAGCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496
| || ||| |||| ||| ||| | ||| ||||||||||| | ||| || |||||
Sbjct 972296 GGAAGCAGGAGGACAGCTGG-GACTGGGGAGTGCCCGCATTAAAGAGGGTGGGGGAAGCA 972354
Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT----AGCT-GAGTCTATAT 63551
|| || || | || || | || ||||| |||||||| ||| || | | |
Sbjct 972355 TGCGTGAAGAACTTGCTCGACATGAGGTTGTAGGTCTCAATGACACGCTCGATGTTGTCT 972414
Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611
||| |||| || || || |||||||| | ||||||||| || | || |||||||
Sbjct 972415 CCC-CAGATG----CCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACGATCT 972469
Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669
|| || | || | | ||| || || | || || || ||||| || | |||
Sbjct 972470 TGCCGTCGAGCTTGAGAAGGTATGAGCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGT 972529
Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAC 63729
||||| || || ||||| | ||| |||||| | || ||||| | | | || |
Sbjct 972530 TGAAA--TCGCGATCGTAGACAATGGCCGAGTCCAATTCTTCCTTGTGCCTCATGAC-GC 972586
Query 63730 ATCCATGGTAATACTTGA--AATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAG 63787
| ||| | | ||||| || || || || ||| | |||||||| |||||||||
Sbjct 972587 ACTCAT-ATGTTTCTTGAGCGATCATGGGCGAAGCTTTGCTGTTTTTAGGGTTGACATAG 972645
Query 63788 TTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCTTTGTGTAGATTTGA 63846
| | | || || || || || | || | ||||| || | ||||| || |||||
Sbjct 972646 TGGTACAAGTCGCTGATGAC-AGACGACCATTGCTTTTTGGTCTGCTTGTGGAGGTTTGA 972704
Query 63847 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
||||| || | ||||||||| |||||||| || || ||
Sbjct 972705 CACGGCAATGCGAGCGGCTAGGATGGCATAGTCGGGGTG 972743
>seq224
Length=800728
Score = 96.9 bits (106), Expect = 4e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| |||||||| ||| ||||| ||||| | | || | |||||||| || || ||
Sbjct 538009 CAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 538068
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|||||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||
Sbjct 538069 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAG 538128
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 32837
|| || || || || || ||||||| || | || || | || | |||| ||
Sbjct 538129 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTCCTTGTCCTGG 538188
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
|||||| |||||| |||||||||||
Sbjct 538189 ATCCACCGGATAGCCCAGTCGGCCTTCTT 538217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633620642146400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |