Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq549 132 4e-26
seq1102 123 2e-23
seq769 95.1 1e-14
seq658 86.0 5e-12
>seq549
Length=514063
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || || || | || || || || |||| ||||| ||||| |
Sbjct 328559 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCT 328500
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | ||| || |||| || || || ||||||||||| || || |||||
Sbjct 328499 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 328440
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| ||| | ||||| ||||||| ||||||| |||
Sbjct 328439 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 328380
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || |||||| | || | || |||| |||| || |||
Sbjct 328379 AACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 328329
>seq1102
Length=1535874
Score = 123 bits (136), Expect = 2e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
|||| || || || ||||| ||||| |||| ||||| || || | | |||||||| | |
Sbjct 933844 TTGTCAAGACCTTGACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCG 933785
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
|| | |||| || || || ||||||||||| ||||| || || || || ||||| |
Sbjct 933784 ACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGA 933725
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| || |||||||| ||| | || || ||||||| | ||||| |||||||| || || |
Sbjct 933724 TCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGG 933665
Query 22409 AATCCACC 22416
| ||||||
Sbjct 933664 AGTCCACC 933657
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || ||||| |||||||||| || || | | |
Sbjct 933398 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC 933339
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| ||||||||||||||||| || || ||
Sbjct 933338 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAG 933279
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| ||||| ||||| |||||| ||||| | ||| || |||
Sbjct 933278 CAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATAAC 933219
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 933218 ATCCAGAAGGA 933208
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| | ||||| || || |||| || || || || | |
Sbjct 933626 ATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCA 933567
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || ||||| || ||||| || ||||| || ||||| || || ||
Sbjct 933566 GACACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 933507
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| ||||| || || ||| | || || ||| || | ||| ||||||
Sbjct 933506 CAGCGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAAC 933447
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || |||||||||
Sbjct 933446 ATTCAGAAGGAATCCACC 933429
>seq769
Length=2557781
Score = 95.1 bits (104), Expect = 1e-14
Identities = 280/426 (66%), Gaps = 13/426 (3%)
Strand=Plus/Plus
Query 129985 GGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACC 130044
|| ||||||||| |||| |||| | || || || ||||| |||| ||||| | |
Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955
Query 130045 CACAGGGCGTACAACAAATCTCGCGCTT----TTCTATCCTCGGCACCCATGTTACGTTT 130100
|| || || | ||||| || || || ||| |||| | | | || ||
Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCC-TCCTTGCCGTGGTTCTTGCG--- 972011
Query 130101 CAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC 130160
||| ||||| || ||| | | || ||||||||||| || | || || || | |||||
Sbjct 972012 CAGATCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCC 972071
Query 130161 CTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217
|| ||||| || ||||| |||| | | | |||||| |||| || | |||
Sbjct 972072 AGGGCGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCAT 972131
Query 130218 TGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAAC 130277
| ||| ||||||| |||||||| |||| ||||| | |||| ||| ||||
Sbjct 972132 GGGGACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAAT 972191
Query 130278 GTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAA-TCGCGTA 130336
| || ||| | ||||| || |||||| | | || || |||| || ||| || | |
Sbjct 972192 GCGGTGGACGTTGAGACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTG-A 972250
Query 130337 GCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGAGGCCA 130396
| || || ||||| || | || ||||| || || |||| || ||||| || |||| ||
Sbjct 972251 GGGTGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACA 972310
Query 130397 ATTGGG 130402
||||
Sbjct 972311 GCTGGG 972316
>seq658
Length=2797339
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| || || ||||| | |||| ||| |
Sbjct 1468438 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCAT 1468379
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || ||||||||||| || || || || || || || ||
Sbjct 1468378 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 1468319
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| ||||| ||| | ||||| ||| ||| | ||||| |||||||| || ||
Sbjct 1468318 GATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAA 1468259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419720664466210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |