Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq549 132 4e-26 seq1102 123 2e-23 seq769 95.1 1e-14 seq658 86.0 5e-12 >seq549 Length=514063 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || || || |||| ||||| ||||| | Sbjct 328559 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCT 328500 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| || |||| || || || ||||||||||| || || ||||| Sbjct 328499 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 328440 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | ||||| ||||||| ||||||| ||| Sbjct 328439 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 328380 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || |||||| | || | || |||| |||| || ||| Sbjct 328379 AACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGTCTGCGTGGCGGT 328329 >seq1102 Length=1535874 Score = 123 bits (136), Expect = 2e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 |||| || || || ||||| ||||| |||| ||||| || || | | |||||||| | | Sbjct 933844 TTGTCAAGACCTTGACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCG 933785 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 || | |||| || || || ||||||||||| ||||| || || || || ||||| | Sbjct 933784 ACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGA 933725 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | || |||||||| ||| | || || ||||||| | ||||| |||||||| || || | Sbjct 933724 TCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGG 933665 Query 22409 AATCCACC 22416 | |||||| Sbjct 933664 AGTCCACC 933657 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || ||||| |||||||||| || || | | | Sbjct 933398 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC 933339 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||||||||| || || || Sbjct 933338 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAG 933279 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| ||||| ||||| |||||| ||||| | ||| || ||| Sbjct 933278 CAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATAAC 933219 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 933218 ATCCAGAAGGA 933208 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | ||||| || || |||| || || || || | | Sbjct 933626 ATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCA 933567 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || ||||| || ||||| || ||||| || ||||| || || || Sbjct 933566 GACACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 933507 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| ||||| || || ||| | || || ||| || | ||| |||||| Sbjct 933506 CAGCGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAAC 933447 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || ||||||||| Sbjct 933446 ATTCAGAAGGAATCCACC 933429 >seq769 Length=2557781 Score = 95.1 bits (104), Expect = 1e-14 Identities = 280/426 (66%), Gaps = 13/426 (3%) Strand=Plus/Plus Query 129985 GGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACC 130044 || ||||||||| |||| |||| | || || || ||||| |||| ||||| | | Sbjct 971896 GGGCACATCAAAGTCCATTCGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATC 971955 Query 130045 CACAGGGCGTACAACAAATCTCGCGCTT----TTCTATCCTCGGCACCCATGTTACGTTT 130100 || || || | ||||| || || || ||| |||| | | | || || Sbjct 971956 CAAAGAGCCAAGAACAAGTCACGGGCACGGACTTCC-TCCTTGCCGTGGTTCTTGCG--- 972011 Query 130101 CAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC 130160 ||| ||||| || ||| | | || ||||||||||| || | || || || | ||||| Sbjct 972012 CAGATCAAGAAAGTCGAAGACATCAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCC 972071 Query 130161 CTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217 || ||||| || ||||| |||| | | | |||||| |||| || | ||| Sbjct 972072 AGGGCGCTTGTTGCCACCCTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCAT 972131 Query 130218 TGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAAC 130277 | ||| ||||||| |||||||| |||| ||||| | |||| ||| |||| Sbjct 972132 GGGGACCAGACCGTTGGATGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAAT 972191 Query 130278 GTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAA-TCGCGTA 130336 | || ||| | ||||| || |||||| | | || || |||| || ||| || | | Sbjct 972192 GCGGTGGACGTTGAGACCGATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTG-A 972250 Query 130337 GCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGAGGCCA 130396 | || || ||||| || | || ||||| || || |||| || ||||| || |||| || Sbjct 972251 GGGTGTCGTAAATACCGTCAATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACA 972310 Query 130397 ATTGGG 130402 |||| Sbjct 972311 GCTGGG 972316 >seq658 Length=2797339 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| || || ||||| | |||| ||| | Sbjct 1468438 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCAT 1468379 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || ||||||||||| || || || || || || || || Sbjct 1468378 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 1468319 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| ||||| ||| | ||||| ||| ||| | ||||| |||||||| || || Sbjct 1468318 GATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAA 1468259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419720664466210