Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1324 100 6e-16 seq991 93.3 9e-14 >seq1324 Length=1219284 Score = 100 bits (110), Expect = 6e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | |||||||| ||||| | ||||||| ||||| || ||||| ||||| | Sbjct 981746 CCAACTTTGGTCTGGATGCCGAGCTGGTCTCTCACTCCCGCATGCGTGGTCTGTCTGGTG 981687 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| ||| | | || |||| ||||| | ||||||| ||||||| Sbjct 981686 GCCAGCGTGTCAAGACCGTCCTGGCCGCCTGCTCA-TGGCAGCGCCCTCACTTGATCGTC 981628 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 |||||||||||||||||||| || |||||||| Sbjct 981627 CTCGACGAGCCTACCAACTACCTTGACCGCGA 981596 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| || || |||| ||||| || || || |||| ||||| ||||| ||| Sbjct 983118 GGTGAGGACCTCTGCAACTGCACGTTCTCCCTTGCCTACGGTGCCAAGATCCTGCTTAAC 983059 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| | | |||||||| | || || ||||| ||||||||| || | Sbjct 983058 CAGACTCATCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTTTGCGGTCCCAACGGTTCC 982999 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||| |||||| ||||||||||| |||| ||| | || || || ||||| ||| Sbjct 982998 GGTAAATCCACTCTCATGCGCGCCATCAACAACGAACAGGTCGAGGGTTTCCCTAA-GCA 982940 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 ||||| | ||| |||| || |||||||| |||||||| Sbjct 982939 GAGCGAGGTTAAGACCGTGTTCGTCGAGCACGATCTCGACTCC 982897 >seq991 Length=2046878 Score = 93.3 bits (102), Expect = 9e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || ||||| ||||||||||| |||||||| ||||| | || ||||| | | | Sbjct 245757 GTTGGCTCGCTGTCTGGTGGTTGGAAAATGAAGCTCGCCCTTGCGCGTGCCATGTTGCAG 245698 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 || || || ||||| || ||||||||||| || ||||| | ||| |||||| | || Sbjct 245697 CGCGCTGACGTCCTCCTTCTTGATGAGCCTACGAACCATCTTGACGTTACCAACATTGCT 245638 Query 279816 TGGCTAGTGTCCTACCTAA 279834 ||| | | | |||||||| Sbjct 245637 TGGTTGGAGAACTACCTAA 245619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027817915425994