Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 122 7e-23
>seq1102
Length=1535874
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || ||||| || ||||||||||| |||
Sbjct 933397 ATACCACCACGGAGACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCG 933456
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| || || ||||| || || || ||||| |||| || ||||| ||||| |||
Sbjct 933457 CTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGA 933516
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || |||||| ||| | | || | ||||| | || |||
Sbjct 933517 GGAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCG 933576
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || |||||||| || ||||| || || ||||||||
Sbjct 933577 ACCTCCAGGGTGATTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| | || | || || || || || |||||||| |||
Sbjct 933625 ATACCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 933684
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || |||||||| || || || ||| |||| |||||||| ||||| |||
Sbjct 933685 GAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGA 933744
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | || | ||| |||| | |||
Sbjct 933745 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTCG 933804
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
|| || | ||| | ||||||||||||| || || ||||
Sbjct 933805 ACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAA 933844
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | ||| | ||| | || || || || || |||||||| |||
Sbjct 933906 ATACCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 933965
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||| ||| || ||||| || || ||| |||| |||||||| ||||| |||
Sbjct 933966 GACAGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGA 934025
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || || || ||||| || | | || | ||| |||| | |||
Sbjct 934026 GGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTCTCG 934085
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360
|| || | ||| | || ||||| ||||
Sbjct 934086 ACCTCAAGGGTGATGGTCTTGCCCGTCA 934113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420127057363608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |