Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 116 9e-21
seq549 111 4e-19
seq658 95.1 3e-14
>seq1102
Length=1535874
Score = 116 bits (128), Expect = 9e-21
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || ||||| || | ||| || || ||||| || |||||||
Sbjct 933628 CCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 933687
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || ||||||||||||||||| || | ||
Sbjct 933688 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 933747
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || |||||||| |||| || ||||| || || | ||| |||| ||
Sbjct 933748 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTC---TCG 933804
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATAT 288467
|| || || ||||| || || ||||||| |||||||| | |||
Sbjct 933805 ACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAACTAT 933848
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 6/208 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| |||||||| | ||| || || ||||| || |||||||
Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | ||| || || ||||||||||||||||| || | ||
Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || ||||||||||| |||| ||||| || || || | ||| |||| ||
Sbjct 934029 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTC---TCG 934085
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCA 288451
|| || || ||||| ||||| || ||||
Sbjct 934086 ACCTCAAGGGTGATGGTCTTGCCCGTCA 934113
>seq549
Length=514063
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| ||||| || | || || || ||||||
Sbjct 328366 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 328425
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || ||||| || || || |||||||| || | || || ||
Sbjct 328426 ATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 328485
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || || || || || ||||| ||||| || || || |||||||||
Sbjct 328486 TCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 328545
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 328546 AAAATCTGCAT 328556
>seq658
Length=2797339
Score = 95.1 bits (104), Expect = 3e-14
Identities = 203/291 (70%), Gaps = 12/291 (4%)
Strand=Plus/Plus
Query 325964 ACGATAGGCGTGATGAACTTCTT-CAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 326022
|| || || |||||||| ||||| |||||| | ||||| || ||| |||||
Sbjct 799774 ACAATCGGAGTGATGAA-TTCTTGCAAGAAGTCGGGAATGAGGAGGAGAGATGGGAATT- 799831
Query 326023 GCTATGGAA-AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081
|| | ||| |||||| |||| ||||| || ||| | || ||| |||| || |
Sbjct 799832 GCACTTGAAGAAAGTTGATGAGAAGACCCTTGATATGACTACCATCATGATCCTGATCCG 799891
Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTT--TACCGGT 326139
|||| ||||| | |||||| |||||||| |||||| |||| |||| | | |
Sbjct 799892 TCATAATCATGAGATGACCATAACGAAGACTCTTTGTGTCTGTGTAGACTTGCTTATGCT 799951
Query 326140 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCC- 326197
| ||| || || ||||| |||| || ||| |||||| | |||||| ||||| || | |
Sbjct 799952 T--AAGACCCAGGATTTGCTTGATGCTCTG-GATTTCCTGGTTCTTGGTGAT-CTGGTCG 800007
Query 326198 ACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCA 326248
| ||| ||||| | ||||| | | ||||||||||| ||||| || |||
Sbjct 800008 ATGGAGGCATCTCTCACGTTGAGCATCTTTCCACGAAGCGGGAAGACGCCA 800058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179632726062252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |