Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1102 116 9e-21 seq549 111 4e-19 seq658 95.1 3e-14 >seq1102 Length=1535874 Score = 116 bits (128), Expect = 9e-21 Identities = 161/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | ||| || || ||||| || ||||||| Sbjct 933628 CCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 933687 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || ||||||||||||||||| || | || Sbjct 933688 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 933747 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| |||| || ||||| || || | ||| |||| || Sbjct 933748 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTC---TCG 933804 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATAT 288467 || || || ||||| || || ||||||| |||||||| | ||| Sbjct 933805 ACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAACTAT 933848 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| |||||||| | ||| || || ||||| || ||||||| Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| || || ||||||||||||||||| || | || Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||||||||| |||| ||||| || || || | ||| |||| || Sbjct 934029 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTC---TCG 934085 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 || || || ||||| ||||| || |||| Sbjct 934086 ACCTCAAGGGTGATGGTCTTGCCCGTCA 934113 >seq549 Length=514063 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| ||||| || | || || || |||||| Sbjct 328366 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 328425 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || ||||| || || || |||||||| || | || || || Sbjct 328426 ATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 328485 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || ||||| ||||| || || || ||||||||| Sbjct 328486 TCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 328545 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 328546 AAAATCTGCAT 328556 >seq658 Length=2797339 Score = 95.1 bits (104), Expect = 3e-14 Identities = 203/291 (70%), Gaps = 12/291 (4%) Strand=Plus/Plus Query 325964 ACGATAGGCGTGATGAACTTCTT-CAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 326022 || || || |||||||| ||||| |||||| | ||||| || ||| ||||| Sbjct 799774 ACAATCGGAGTGATGAA-TTCTTGCAAGAAGTCGGGAATGAGGAGGAGAGATGGGAATT- 799831 Query 326023 GCTATGGAA-AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081 || | ||| |||||| |||| ||||| || ||| | || ||| |||| || | Sbjct 799832 GCACTTGAAGAAAGTTGATGAGAAGACCCTTGATATGACTACCATCATGATCCTGATCCG 799891 Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTT--TACCGGT 326139 |||| ||||| | |||||| |||||||| |||||| |||| |||| | | | Sbjct 799892 TCATAATCATGAGATGACCATAACGAAGACTCTTTGTGTCTGTGTAGACTTGCTTATGCT 799951 Query 326140 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCC- 326197 | ||| || || ||||| |||| || ||| |||||| | |||||| ||||| || | | Sbjct 799952 T--AAGACCCAGGATTTGCTTGATGCTCTG-GATTTCCTGGTTCTTGGTGAT-CTGGTCG 800007 Query 326198 ACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCA 326248 | ||| ||||| | ||||| | | ||||||||||| ||||| || ||| Sbjct 800008 ATGGAGGCATCTCTCACGTTGAGCATCTTTCCACGAAGCGGGAAGACGCCA 800058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179632726062252