Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq224 91.5 3e-13
seq1324 89.7 1e-12
seq658 89.7 1e-12
>seq224
Length=800728
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/227 (69%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | ||| |||||||| | ||| || |||| |||
Sbjct 537956 ATCATCACCGATGCCGTCACTATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCGCC 537897
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | ||||||||||| || ||| ||||||||||| ||||| || || || |
Sbjct 537896 CTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTG 537837
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAA---CTCCAAGAACCCCTTTGCCTTTATG 243678
||||||| | || |||| || || ||||| |||||| |||||| | ||| |||
Sbjct 537836 CTCATCGCCTTGGGCAATGACAAGGTCTACAAGGTCTCCAA---CCCCTTCGACTTCATG 537780
Query 243679 GAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
||| ||| || || || || || ||||||||||| ||||| ||
Sbjct 537779 GAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGT 537733
>seq1324
Length=1219284
Score = 89.7 bits (98), Expect = 1e-12
Identities = 172/251 (69%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164
|||| ||| ||| ||| | || ||||| |||||||||||| || ||| | | || |
Sbjct 982869 AGTCGATGGTAGTCATCTCAGTATCGGCGGAGTCGAGATCGTGCTCGACGAACACGGTCT 982928
Query 334165 TCAAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGA 334223
| | | || || |||| |||||| | | ||| |||| || |||||||| |||
Sbjct 982929 TAACCTCGCTCTGCTTAGGGAAACCCT-CGACCTGTTCGTTGTTGATGGCGCGCATGAGA 982987
Query 334224 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTG 334283
|| |||||||| | ||||| || || || |||||||| || | ||||||||||| |
Sbjct 982988 GTGGATTTACCGGAACCGTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTCAGGCGG 983047
Query 334284 AACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 334343
| | || | ||| || || || || |||| || || || || || || | ||
Sbjct 983048 AGATGAGTCTGGTTAAGCAGGATCTTGGCACCGTAGGCAAGGGAGAACGTGCAGTTGCAG 983107
Query 334344 AGATCCTCACC 334354
|| ||||||||
Sbjct 983108 AGGTCCTCACC 983118
>seq658
Length=2797339
Score = 89.7 bits (98), Expect = 1e-12
Identities = 202/291 (69%), Gaps = 12/291 (4%)
Strand=Plus/Plus
Query 298085 ACGATAGGCGTGATGAACTTCTT-CAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA 298143
|| || || |||||||| ||||| |||||| | ||||| || ||| |||||
Sbjct 799774 ACAATCGGAGTGATGAA-TTCTTGCAAGAAGTCGGGAATGAGGAGGAGAGATGGGAATT- 799831
Query 298144 GCTATGGAA-AAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 298202
|| | ||| |||||| |||| ||||| || ||| | || ||| |||| || |
Sbjct 799832 GCACTTGAAGAAAGTTGATGAGAAGACCCTTGATATGACTACCATCATGATCCTGATCCG 799891
Query 298203 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTT--TACCGGT 298260
|||| ||||| | |||||| |||||||| |||||| |||| |||| | | |
Sbjct 799892 TCATAATCATGAGATGACCATAACGAAGACTCTTTGTGTCTGTGTAGACTTGCTTATGCT 799951
Query 298261 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCC- 298318
| ||| || || ||||| |||| || ||| |||||| | |||||| ||||| || | |
Sbjct 799952 T--AAGACCCAGGATTTGCTTGATGCTCTG-GATTTCCTGGTTCTTGGTGAT-CTGGTCG 800007
Query 298319 ACGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCA 298369
| ||| ||||| | || || | | ||||||||||| ||||| || |||
Sbjct 800008 ATGGAGGCATCTCTCACGTTGAGCATCTTTCCACGAAGCGGGAAGACGCCA 800058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102859736647900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |