Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq224 118 1e-21
seq549 107 2e-18
seq1102 100 3e-16
seq658 89.7 5e-13
>seq224
Length=800728
Score = 118 bits (130), Expect = 1e-21
Identities = 349/523 (67%), Gaps = 25/523 (5%)
Strand=Plus/Minus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385
|| || ||| |||| || ||||| | ||||| || ||||||| || | | | ||
Sbjct 538232 GTTCCTTGCATTCGTAAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTCC 538173
Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445
| | || |||| | || |||||||| || ||||| | || || ||| |
Sbjct 538172 TCCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCC 538113
Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505
|||||| ||||||| | | || | | || | |||||||| ||||| ||| ||||
Sbjct 538112 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAAC 538053
Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTAC 52559
||| | || || || |||||||| || ||||| || || || ||||| || | ||
Sbjct 538052 GAGCTCATCTCTCGTGACGAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTTCTCCCAC 537993
Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGC 52618
|| || | | || | || ||| || | || | ||| || ||| || ||
Sbjct 537992 CTGAAGCACC-GCCCCAGCAA--GGAG-CGCATCAGG-----GAG-ATCATCACCGATGC 537943
Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678
|| ||||||| |||| || || || | || || || || ||||||||||||||
Sbjct 537942 CGTCACTATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCGCCCTGCTGGGCATGAA 537883
Query 52679 CGCGCAGTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737
| | || | ||| ||||||||||||| || || ||||||||| | | | || |
Sbjct 537882 CTC-CACCCTGATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCAT-CGCCTTG 537825
Query 52738 GGCA--GCCAAAGTACTTCAACG-CTCGCAATCCGTTTGAGTTTATGAACAACATTTCGC 52794
|||| | ||| || || ||| | ||| ||| || || || || ||| | ||||| || |
Sbjct 537824 GGCAATGACAAGGT-CTACAAGGTCTC-CAACCCCTTCGACTTCATGGAGAACATCTCCC 537767
Query 52795 TTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| | |||||||||||||| ||||||||||| || | ||| ||
Sbjct 537766 TCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCCGATTA 537724
>seq549
Length=514063
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| |||| ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || || |||| |||| |||||||| ||||| || ||
Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | |||| || | |||||| | ||||||||
Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATGGTGTCCGAAGACTCCAC 328508
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || || || || || || |||||||||||
Sbjct 328509 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 328556
>seq1102
Length=1535874
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| ||||||||||||||||||| || || ||| ||||| || || || | |
Sbjct 933433 GATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCA 933492
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--A 138538
|||| || ||||| ||||| ||||| || ||||| || || ||| | || | |||
Sbjct 933493 AAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTCGATTTGAC 933551
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | ||||| | ||||| ||||| | || | || || || || || ||||
Sbjct 933552 ATTG-TCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTGCCGGTGAGCGTTT 933610
Query 138599 TTACAAAAATCTGCAT 138614
| || || ||||||||
Sbjct 933611 TGACGAAGATCTGCAT 933626
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||||| || | ||| | ||| | | | |||||||| || |||||||||||| |
Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||||||||||| || |||| |||| |||||||| ||||| |||||
Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028
Query 138508 ATACCTTCTTTGTC 138521
|| || || || ||
Sbjct 934029 ATGCCCTCCTTATC 934042
>seq658
Length=2797339
Score = 89.7 bits (98), Expect = 5e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||| || || || ||||||||| || || || | | |||
Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543
| || ||||| ||||| || || || || || ||||| ||| || || | ||||
Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 1468375
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | |||||||| |||||||||||||| || | || || || || || || || ||
Sbjct 1468376 TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 1468435
Query 138604 AAA 138606
|||
Sbjct 1468436 AAA 1468438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496253504496480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |