Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq224 118 1e-21 seq549 107 2e-18 seq1102 100 3e-16 seq658 89.7 5e-13 >seq224 Length=800728 Score = 118 bits (130), Expect = 1e-21 Identities = 349/523 (67%), Gaps = 25/523 (5%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| |||| || ||||| | ||||| || ||||||| || | | | || Sbjct 538232 GTTCCTTGCATTCGTAAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTCC 538173 Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445 | | || |||| | || |||||||| || ||||| | || || ||| | Sbjct 538172 TCCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCC 538113 Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505 |||||| ||||||| | | || | | || | |||||||| ||||| ||| |||| Sbjct 538112 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAAC 538053 Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTAC 52559 ||| | || || || |||||||| || ||||| || || || ||||| || | || Sbjct 538052 GAGCTCATCTCTCGTGACGAAGGTCTCCACACTGATTTCGCCTGCCTGCTCTTCTCCCAC 537993 Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGC 52618 || || | | || | || ||| || | || | ||| || ||| || || Sbjct 537992 CTGAAGCACC-GCCCCAGCAA--GGAG-CGCATCAGG-----GAG-ATCATCACCGATGC 537943 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || ||||||| |||| || || || | || || || || |||||||||||||| Sbjct 537942 CGTCACTATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCGCCCTGCTGGGCATGAA 537883 Query 52679 CGCGCAGTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 | | || | ||| ||||||||||||| || || ||||||||| | | | || | Sbjct 537882 CTC-CACCCTGATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCAT-CGCCTTG 537825 Query 52738 GGCA--GCCAAAGTACTTCAACG-CTCGCAATCCGTTTGAGTTTATGAACAACATTTCGC 52794 |||| | ||| || || ||| | ||| ||| || || || || ||| | ||||| || | Sbjct 537824 GGCAATGACAAGGT-CTACAAGGTCTC-CAACCCCTTCGACTTCATGGAGAACATCTCCC 537767 Query 52795 TTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | | |||||||||||||| ||||||||||| || | ||| || Sbjct 537766 TCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCCGATTA 537724 >seq549 Length=514063 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||||| || | || | | | |||||||| || |||||||||||| Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| |||||||| ||||| || || Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | |||||| | |||||||| Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATGGTGTCCGAAGACTCCAC 328508 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || || ||||||||||| Sbjct 328509 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 328556 >seq1102 Length=1535874 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||||||| || || ||| ||||| || || || | | Sbjct 933433 GATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCA 933492 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--A 138538 |||| || ||||| ||||| ||||| || ||||| || || ||| | || | ||| Sbjct 933493 AAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTCGATTTGAC 933551 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||||| | ||||| ||||| | || | || || || || || |||| Sbjct 933552 ATTG-TCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTGCCGGTGAGCGTTT 933610 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 933611 TGACGAAGATCTGCAT 933626 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| || | ||| | ||| | | | |||||||| || |||||||||||| | Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||||| || |||| |||| |||||||| ||||| ||||| Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028 Query 138508 ATACCTTCTTTGTC 138521 || || || || || Sbjct 934029 ATGCCCTCCTTATC 934042 >seq658 Length=2797339 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| || || || ||||||||| || || || | | ||| Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | || ||||| ||||| || || || || || ||||| ||| || || | |||| Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG- 1468375 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||||| |||||||||||||| || | || || || || || || || || Sbjct 1468376 TCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 1468435 Query 138604 AAA 138606 ||| Sbjct 1468436 AAA 1468438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496253504496480