Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq549 165 9e-36
seq1102 152 6e-32
seq658 129 7e-25
>seq549
Length=514063
Score = 165 bits (182), Expect = 9e-36
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||||| |||| || |||||| ||||| ||||||||||| || ||||| |
Sbjct 328341 ACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 328400
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| |||||||||||||||||||| |||| ||||||||||||| ||| | || ||||||
Sbjct 328401 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTT 328460
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||| || ||||| || | |||||
Sbjct 328461 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGAT 328520
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
||| |||||||| || || || || || || ||||| ||||
Sbjct 328521 GGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 328561
>seq1102
Length=1535874
Score = 152 bits (168), Expect = 6e-32
Identities = 154/198 (78%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| || |||||| ||||||||| | || || | |||||||||
Sbjct 933202 GTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTGCCC 933261
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
|| || ||||||||||||||||| | || | | |||||||||| ||||| |||||
Sbjct 933262 GCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTG 933321
Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575
| ||| | | | ||||||||||| || || || | |||||||||||||| ||||| ||
Sbjct 933322 A-CGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGTCAGGGT 933380
Query 46576 TTTAACAAAGATTTGCAT 46593
|| |||||||| |||||
Sbjct 933381 CTTGACAAAGATCTGCAT 933398
Score = 127 bits (140), Expect = 2e-24
Identities = 142/186 (76%), Gaps = 8/186 (4%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || |||||||||||||||||
Sbjct 933663 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAA 933722
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||||||||| | || | || |||||||||| ||||||| ||||| |||
Sbjct 933723 GATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 933781
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | || || |||| || || || | |||||||||||||| |||| || |
Sbjct 933782 TGTCGATGGTATCGGAGCTC---TCGACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCT 933838
Query 46578 TAACAA 46583
| ||||
Sbjct 933839 TGACAA 933844
Score = 102 bits (112), Expect = 9e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | |||||| |||| || ||||| || || ||||||||| | || || |
Sbjct 933411 ACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCC 933470
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| ||||||||||| || || || || | |||||||||||| | || | || |||||
Sbjct 933471 GTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTT 933530
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| |||| | | | |||||| || || || |||| |||||
Sbjct 933531 ATCCTGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGAT 933590
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || |||||||| || ||||| |||||
Sbjct 933591 TGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Score = 102 bits (112), Expect = 9e-17
Identities = 127/173 (73%), Gaps = 6/173 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || || || | || ||||| ||||||||||||||
Sbjct 933944 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAA 934003
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||||||||| | || | || |||||| ||| ||||||| ||| | |
Sbjct 934004 GATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATT 934063
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | || || |||| || || || | |||||||| ||||||||||
Sbjct 934064 GTCGATGGTATCGGAGCTC---TCGACCTCAAGGGTGATGGTCTTGCCCGTCA 934113
>seq658
Length=2797339
Score = 129 bits (142), Expect = 7e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || || || |||| |||||||||||||| || || |
Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | || |||||||||| |||||| ||||| |
Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1468376
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| ||| ||||| || | |||||||| |||||||| || || || || |
Sbjct 1468377 CGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 1468436
Query 46584 A 46584
|
Sbjct 1468437 A 1468437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565228268101680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |