Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq224 159 3e-34 seq549 149 6e-31 seq1102 114 1e-20 seq658 111 2e-19 >seq224 Length=800728 Score = 159 bits (176), Expect = 3e-34 Identities = 352/518 (68%), Gaps = 16/518 (3%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| |||||| || || || ||| | || ||||| || || || || || || | Sbjct 537705 CATGACGCCAGCCTTCTGGTAATCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 537764 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707 | ||| ||| | ||| || || |||||||||| |||||| |||| |||| Sbjct 537765 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAGACCTTGTAGACCTTGTCATTGCC 537824 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT--GGTTTCG 132765 | ||| ||| |||||| | || || |||||||||||||| ||| ||| || | | Sbjct 537825 CA--AGG-CGATGAGCAGACGATCAGCGACGAACTCGATGTACTGCTTCATCAGGGT--G 537879 Query 132766 CAATTAAGTCCCAGCA-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGC 132824 | || | ||||||| | |||| || || || ||||| | || |||||||| | Sbjct 537880 GAGTTCATGCCCAGCAGGGCGCA-GGGAAGGGCCTCGGTCAAGAATTCCTGCTCGATAGT 537938 Query 132825 GACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884 ||| || ||||||| ||| ||||| | |||| || ||| || || ||| || || Sbjct 537939 GACGGCATCGGTGATGATCTCCCTGATGCGCTCCTTGCTGGGGCGGTGCTTCAGGTGGGA 537998 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||| | || ||| || || || || | || ||||| | || ||||| |||||| Sbjct 537999 GAAGAGCAGGCAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGA 538058 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||| |||||||| || || || || |||||||| || |||| ||| || ||| Sbjct 538059 GAAGGTCAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCC 538118 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064 ||||||| ||||| ||||| ||||| || || || |||| | || | || || Sbjct 538119 ACTGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTC 538178 Query 133065 TTTG--CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||| ||| |||||| || | ||||| |||||||| Sbjct 538179 CTTGTCCTG--GATCCACCGGATAGCCCAGTCGGCCTT 538214 Score = 138 bits (152), Expect = 1e-27 Identities = 196/275 (71%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 |||| ||| || ||| || || | || ||||| | ||||||||| ||| || ||| Sbjct 538340 TAGGAGTCAATCAGGAGTGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAG 538399 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || |||||| | ||| || || ||| |||||||| ||||| Sbjct 538400 CCGTAGAAGCAACGGGCCTCGGGAATCTGAACCTCGCCGCTGAATCGCTCGACGAGATTC 538459 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 ||||||||||| || || ||||||||| |||||||| | |||| | ||| | | Sbjct 538460 TCGTTGACGATACCATCTGAGGCGGCGAAGAAGGCCAGGATGTGCGACACGAAGTACTTC 538519 Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| ||| | | ||| | ||| ||| || |||||||||| || || | || ||| Sbjct 538520 TCGTCATCGGTGAGGCGGTTGTTCCAATCGTGCATGTCCTTGGAGAGATCAATTTCTTCG 538579 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| || || |||||||| || |||||||| Sbjct 538580 GCAGTCCAGAAGGAAGCCTCGGCCTTCTTGTACAT 538614 >seq549 Length=514063 Score = 149 bits (164), Expect = 6e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||||||||| ||||||||| | || || ||| | Sbjct 328559 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCT 328500 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || || |||| ||||| ||||| || || ||||| Sbjct 328499 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 328440 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||||| Sbjct 328439 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 328380 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||||| | || ||||| ||||||||||| || | ||||| Sbjct 328379 AACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGTCTGCGTGGCGG 328330 >seq1102 Length=1535874 Score = 114 bits (126), Expect = 1e-20 Identities = 154/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 38249 AATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAG 38308 |||| | || || || | || ||||||||||||||| | || |||||| | |||| | Sbjct 933849 AATAGTTGTCAAGACCTTGACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATAC 933790 Query 38309 CGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGC 38367 | | | |||| | || || |||| ||||| ||||| ||||| | ||||| |||| Sbjct 933789 CATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGC 933731 Query 38368 GGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 38427 | || || | ||| ||||| ||||| || |||| |||||||| |||||||||||||| Sbjct 933730 GTCTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCC 933671 Query 38428 AAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | ||||| | || ||||| | || || ||| Sbjct 933670 AGAAGGAGTCCACCCTGCACCTCGTTCTCCGT 933639 Score = 109 bits (120), Expect = 5e-19 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || |||||||||||||| | || || ||| | | | Sbjct 933398 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC 933339 Query 38304 GACAGCGT-GCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| ||||| |||||| | |||| Sbjct 933338 GACACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACC 933281 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| | || | |||||||| ||| |||| || | |||||| || | |||||| | Sbjct 933280 AGCAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATA 933221 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||| || || || | || || ||| | | ||||| Sbjct 933220 ACATCCAGAAGGAGAGC-ACTCTCCACCTCGTTCTCCGTCTTCGTGGCGG 933172 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||||||||| ||||| || |||||| | || |||||| | | Sbjct 933626 ATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCA 933567 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | ||| || || | || || || || ||||| | ||||| Sbjct 933566 GACACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 933507 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || ||||| || |||| || || | | |||||||||| Sbjct 933506 CAGCGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAAC 933447 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| | || ||||| ||||||| ||| Sbjct 933446 ATTCAGAAGGAATCCACCCTGCACCTGGTGCTTCGT 933411 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 |||||||| ||||||||| | || |||||| | |||| | | | | | | || Sbjct 934111 ACGGGCAAGACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAATGTGAAGTCG 934052 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| || || ||||| ||||| | ||||| ||||| || || | ||| ||||| Sbjct 934051 AAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933992 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || || || || | || ||||| ||||||||||||||| ||||| | || || ||| Sbjct 933991 CAACTCGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 933932 Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470 | || || || || |||| || Sbjct 933931 CTCGTTCTTCGCCTGCGAGGTGG 933909 >seq658 Length=2797339 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| || ||| | |||||| | | Sbjct 1468437 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 1468378 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 1468377 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTG 1468318 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || |||| || ||||| ||||||||||||||| ||| Sbjct 1468317 ATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAAG 1468258 Query 38433 G 38433 | Sbjct 1468257 G 1468257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500163834402560