Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq224 159 3e-34
seq549 149 6e-31
seq1102 114 1e-20
seq658 111 2e-19
>seq224
Length=800728
Score = 159 bits (176), Expect = 3e-34
Identities = 352/518 (68%), Gaps = 16/518 (3%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| |||||| || || || ||| | || ||||| || || || || || || |
Sbjct 537705 CATGACGCCAGCCTTCTGGTAATCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 537764
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707
| ||| ||| | ||| || || |||||||||| |||||| |||| ||||
Sbjct 537765 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAGACCTTGTAGACCTTGTCATTGCC 537824
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT--GGTTTCG 132765
| ||| ||| |||||| | || || |||||||||||||| ||| ||| || | |
Sbjct 537825 CA--AGG-CGATGAGCAGACGATCAGCGACGAACTCGATGTACTGCTTCATCAGGGT--G 537879
Query 132766 CAATTAAGTCCCAGCA-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGC 132824
| || | ||||||| | |||| || || || ||||| | || |||||||| |
Sbjct 537880 GAGTTCATGCCCAGCAGGGCGCA-GGGAAGGGCCTCGGTCAAGAATTCCTGCTCGATAGT 537938
Query 132825 GACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884
||| || ||||||| ||| ||||| | |||| || ||| || || ||| || ||
Sbjct 537939 GACGGCATCGGTGATGATCTCCCTGATGCGCTCCTTGCTGGGGCGGTGCTTCAGGTGGGA 537998
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||| | || ||| || || || || | || ||||| | || ||||| ||||||
Sbjct 537999 GAAGAGCAGGCAGGCGAAATCAGTGTGGAGACCTTCGTCACGAGAGATGAGCTCGTTGGA 538058
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| |||| |||||||| || || || || |||||||| || |||| ||| || |||
Sbjct 538059 GAAGGTCAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCGCC 538118
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064
||||||| ||||| ||||| ||||| || || || |||| | || | || ||
Sbjct 538119 ACTGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGAGGAGTC 538178
Query 133065 TTTG--CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
||| ||| |||||| || | ||||| ||||||||
Sbjct 538179 CTTGTCCTG--GATCCACCGGATAGCCCAGTCGGCCTT 538214
Score = 138 bits (152), Expect = 1e-27
Identities = 196/275 (71%), Gaps = 3/275 (1%)
Strand=Plus/Plus
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|||| ||| || ||| || || | || ||||| | ||||||||| ||| || |||
Sbjct 538340 TAGGAGTCAATCAGGAGTGAGTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAG 538399
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| || |||||| | ||| || || ||| |||||||| |||||
Sbjct 538400 CCGTAGAAGCAACGGGCCTCGGGAATCTGAACCTCGCCGCTGAATCGCTCGACGAGATTC 538459
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
||||||||||| || || ||||||||| |||||||| | |||| | ||| | |
Sbjct 538460 TCGTTGACGATACCATCTGAGGCGGCGAAGAAGGCCAGGATGTGCGACACGAAGTACTTC 538519
Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
|||| ||| | | ||| | ||| ||| || |||||||||| || || | || |||
Sbjct 538520 TCGTCATCGGTGAGGCGGTTGTTCCAATCGTGCATGTCCTTGGAGAGATCAATTTCTTCG 538579
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| || || |||||||| || ||||||||
Sbjct 538580 GCAGTCCAGAAGGAAGCCTCGGCCTTCTTGTACAT 538614
>seq549
Length=514063
Score = 149 bits (164), Expect = 6e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||||||||| ||||||||| | || || ||| |
Sbjct 328559 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCT 328500
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || || |||| ||||| ||||| || || |||||
Sbjct 328499 TCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGAC 328440
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||||
Sbjct 328439 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 328380
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| ||||| | || ||||| ||||||||||| || | |||||
Sbjct 328379 AACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGTCTGCGTGGCGG 328330
>seq1102
Length=1535874
Score = 114 bits (126), Expect = 1e-20
Identities = 154/212 (73%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 38249 AATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAG 38308
|||| | || || || | || ||||||||||||||| | || |||||| | |||| |
Sbjct 933849 AATAGTTGTCAAGACCTTGACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATAC 933790
Query 38309 CGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGC 38367
| | | |||| | || || |||| ||||| ||||| ||||| | ||||| ||||
Sbjct 933789 CATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGC 933731
Query 38368 GGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 38427
| || || | ||| ||||| ||||| || |||| |||||||| ||||||||||||||
Sbjct 933730 GTCTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCC 933671
Query 38428 AAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
| ||||| | || ||||| | || || |||
Sbjct 933670 AGAAGGAGTCCACCCTGCACCTCGTTCTCCGT 933639
Score = 109 bits (120), Expect = 5e-19
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||||||||| | || || ||| | | |
Sbjct 933398 ATGCAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC 933339
Query 38304 GACAGCGT-GCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | |||| || || | ||||| ||||| |||||| | ||||
Sbjct 933338 GACACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACC 933281
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| | || | |||||||| ||| |||| || | |||||| || | |||||| |
Sbjct 933280 AGCAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATA 933221
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| ||| || || || | || || ||| | | |||||
Sbjct 933220 ACATCCAGAAGGAGAGC-ACTCTCCACCTCGTTCTCCGTCTTCGTGGCGG 933172
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||||||||| ||||| || |||||| | || |||||| | |
Sbjct 933626 ATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCA 933567
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | ||| || || | || || || || ||||| | |||||
Sbjct 933566 GACACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 933507
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || || || ||||| || |||| || || | | ||||||||||
Sbjct 933506 CAGCGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAAC 933447
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||||| | || ||||| ||||||| |||
Sbjct 933446 ATTCAGAAGGAATCCACCCTGCACCTGGTGCTTCGT 933411
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327
|||||||| ||||||||| | || |||||| | |||| | | | | | | ||
Sbjct 934111 ACGGGCAAGACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAATGTGAAGTCG 934052
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| || || ||||| ||||| | ||||| ||||| || || | ||| |||||
Sbjct 934051 AAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933992
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
|| || || || | || ||||| ||||||||||||||| ||||| | || || |||
Sbjct 933991 CAACTCGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 933932
Query 38448 TTGGTGCTGCGTTTGAGAGGCGG 38470
| || || || || |||| ||
Sbjct 933931 CTCGTTCTTCGCCTGCGAGGTGG 933909
>seq658
Length=2797339
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| || ||| | |||||| | |
Sbjct 1468437 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCATC 1468378
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| | ||||| ||||| ||
Sbjct 1468377 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTG 1468318
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || ||||| ||||| || |||| || ||||| ||||||||||||||| |||
Sbjct 1468317 ATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAAG 1468258
Query 38433 G 38433
|
Sbjct 1468257 G 1468257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500163834402560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |