Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1102 145 2e-29 seq549 145 2e-29 seq658 102 2e-16 >seq1102 Length=1535874 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| || |||||||| || || || ||||| |||| ||| || | || ||||| Sbjct 933645 AACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTC 933704 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || || || ||||| ||||||||||| || ||||| || Sbjct 933705 AAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 933764 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || ||||| || || || || || |||||||| | || || Sbjct 933765 GATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTTTT 933824 Query 195111 TCCTGTCAAAGTTTTTAC 195128 || ||||| || || || Sbjct 933825 GCCGGTCAAGGTCTTGAC 933842 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||| || || ||||| ||||| ||| | |||| || |||||| Sbjct 933418 ACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCG 933477 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || |||||||| || || ||||| |||||||||||||| || || ||| Sbjct 933478 AGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGA 933537 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| || || || ||||| || || || || ||||| | ||||| Sbjct 933538 ATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTG 933597 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 933598 CCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || || |||||||| || || || ||||| |||| || || | ||||| || Sbjct 933926 AACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTC 933985 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| || |||||||| || || || ||||| ||||||||||| || || || || Sbjct 933986 GAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTG 934045 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || || || ||||| || || || || || |||||||| | ||||| Sbjct 934046 GATCTTCGACTTCACATTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTCTT 934105 Query 195111 TCCTGTCA 195118 || |||| Sbjct 934106 GCCCGTCA 934113 >seq549 Length=514063 Score = 145 bits (160), Expect = 2e-29 Identities = 168/225 (75%), Gaps = 1/225 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | || || ||| Sbjct 328348 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 328407 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 328408 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 328467 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||||||| ||||| |||||||| | ||||| Sbjct 328468 ATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTG 328527 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTG 195156 || || | || || ||||| | ||||| | || ||||||||| Sbjct 328528 CCCGTGAGGGTCTTGACGAAAATCTGCATCT-TGCCTACTTGGTG 328571 >seq658 Length=2797339 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || |||| || || ||||||||||| || || ||||| Sbjct 1468259 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATC 1468318 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || || ||||| || ||||| || || || |||||| || || Sbjct 1468319 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1468378 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| || ||||| || ||||| | ||||| || || | || || ||||| Sbjct 1468379 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 1468437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109461215355878