Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1102 102 5e-17 seq549 95.1 8e-15 seq658 86.0 4e-12 >seq1102 Length=1535874 Score = 102 bits (112), Expect = 5e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||| | ||||| || ||||| ||||||||||| || | || |||| || Sbjct 933189 AACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTC 933248 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || || ||||| || | || |||||||| | || | ||||||||||| Sbjct 933249 CAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTG 933308 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| |||||| | || | || | | |||||| || | || |||||||| Sbjct 933309 AATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTT 933368 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| ||||||||||||||| Sbjct 933369 GCCAGTCAGGGTCTTGACAAAGATCTGCATA 933399 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATC 34831 |||| ||| | ||| ||| ||||||||||| ||||| | || | |||| | || || Sbjct 933418 ACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATG-TTCGGCCGTCTTC 933476 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| ||||| || || || |||||||| | || | || ||||| || Sbjct 933477 GAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTG 933536 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||||| |||||| | |||| || | ||| || || | ||| || || || Sbjct 933537 AATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTT 933596 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || || |||||||||||| Sbjct 933597 GCCGGTGAGCGTTTTGACGAAGATCTGCATA 933627 >seq549 Length=514063 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| || ||| | || | || || Sbjct 328348 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 328407 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| |||| | ||||||||||| Sbjct 328408 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 328467 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | ||||| | ||| | ||| || || | ||| ||||| Sbjct 328468 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGT 328523 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || |||||||| ||||| || || |||||||| || Sbjct 328524 CTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559 >seq658 Length=2797339 Score = 86.0 bits (94), Expect = 4e-12 Identities = 130/183 (71%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| |||| | || || ||||| || || ||||| || Sbjct 1468259 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATC 1468318 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| ||||| ||||| || | Sbjct 1468319 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT--T 1468374 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| || | ||| || |||| ||| ||||| || |||||||| |||||||| Sbjct 1468375 GTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 1468434 Query 34970 AAA 34972 || Sbjct 1468435 GAA 1468437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324627926419152