Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 105 5e-18
>seq1102
Length=1535874
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| ||||| || || || ||||| ||| | |||| | | || || | |||
Sbjct 933424 TGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGGCCGTCTTCGAGCTGC 933483
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| || | ||||| || || || ||||||||||| ||||| ||||| ||
Sbjct 933484 TTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTC 933543
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | ||||| || | || || || || |||| || ||||||||
Sbjct 933544 GATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGTCTTGCCGGTG 933603
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || ||||||||
Sbjct 933604 AGCGTTTTGACGAAGATCTGCAT 933626
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | || ||||| || || || || || ||||| |||| | || | | |
Sbjct 933639 ACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCC 933698
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || || || |||| |||||| || || || |||||||| || ||
Sbjct 933699 GTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTT 933758
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || || || | || | || || || | || || ||||| ||||
Sbjct 933759 GTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGAT 933818
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATAT 101463
||||||||||| || || || |||| |||
Sbjct 933819 GGTTTTGCCGGTCAAGGTCTTGACAACTAT 933848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396271474291938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |